SPELL - Nematode - Dataset Listing
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SPELL Version 2.0.3

Publication Num.
Conditions
Brief Description PubMed ID
Navarro-Herrera D et al., 2018 12 Dihomo-gamma-linolenic acid induces fat loss in C. elegans in an omega-3-independent manner by promoting peroxisomal fatty acid -oxidation.
GEO Record: GSE102802 Platform: GPL19230
Download gene-centric, log2 transformed data: WBPaper00053736.ce.mr.csv (details)
29465730
Nie Y et al., 2017 2 Proanthocyanidin trimer gallate modulates lipid deposition and fatty acid desaturation in Caenorhabditis elegans.
GEO Record: GSE81854 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00052845.ce.mr.csv (details)
28760744
Noble D et al., 2016 40 Genomic Analyses of Sperm Fate Regulator Targets Reveal a Common Set of Oogenic mRNAs in Caenorhabditis elegans.
GEO Record: GSE73070 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00048762.ce.mr.csv (details)
26564160
Noble LM et al., 2015 24 Natural Variation in plep-1 Causes Male-Male Copulatory Behavior in C.elegans.
GEO Record: GSE68351 Platform: GPL10094
Download gene-centric, log2 transformed data: WBPaper00048657.ce.mr.csv (details)
26455306
Norris AD et al., 2014 1 A pair of RNA-binding proteins controls networks of splicing events contributing to specialization of neural cell types.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00045350.ce.rs.csv (details)
24910101
Nousch M et al., 2014 9 The cytoplasmic poly(A) polymerases GLD-2 and GLD-4 promote general gene expression via distinct mechanisms.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00045729.ce.rs.csv (details)
25217583
O'Rourke D et al., 2006 6 Genomic clusters, putative pathogen recognition molecules, and antimicrobial genes are induced by infection of C. elegans with M. nematophilum.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00027722.ce.mr.csv (details)
16809667
Ortega-Cuellar D et al., 2010 5 Biotin starvation with adequate glucose provision causes paradoxical changes in fuel metabolism gene expression similar in rat (Rattus norvegicus), nematode (Caenorhabditis elegans) and yeast (Saccharomyces cerevisiae).
GEO Record: GSE18157 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00037086.ce.mr.csv (details)
20798549
Ortiz MA et al., 2014 16 A new dataset of spermatogenic vs. oogenic transcriptomes in the nematode Caenorhabditis elegans.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00045521.ce.rs.csv (details)
25060624
Osborne Nishimura E et al., 2015 6 Asymmetric transcript discovery by RNA-seq in C. elegans blastomeres identifies neg-1, a gene important for anterior morphogenesis.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00046691.ce.rs.csv (details)
25875092
Park SK et al., 2009 11 Oxidative stress and longevity in Caenorhabditis elegans as mediated by SKN-1.
GEO Record: GSE9301 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00034757.ce.mr.csv (details)
19627265
Passannante M et al., 2010 9 Different Mi-2 complexes for various developmental functions in Caenorhabditis elegans.
GEO Record: GSE21376 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00037765.ce.mr.csv (details)
21060680
Pathare PP et al., 2012 9 Coordinate regulation of lipid metabolism by novel nuclear receptor partnerships.
GEO Record: GSE34856 Platform: GPL9458
Download gene-centric, log2 transformed data: WBPaper00040998.ce.mr.csv (details)
22511885
Pauli F et al., 2006 8 Chromosomal clustering and GATA transcriptional regulation of intestine-expressed genes in C. elegans.
GEO Record: GSE4150 Platform: GPL2766 GPL3390 GPL3411
Download gene-centric, log2 transformed data: WBPaper00026980.ce.mr.csv (details)
16354718
Petrella LN et al., 2011 12 synMuv B proteins antagonize germline fate in the intestine and ensure C. elegans survival.
GEO Record: GSE26825 GSE26824 GSE26823 Platform: GPL5859
Download gene-centric, log2 transformed data: WBPaper00038168.ce.mr.csv (details)
21343362
Pferdehirt RR et al., 2011 6 An MLL/COMPASS subunit functions in the C. elegans dosage compensation complex to target X chromosomes for transcriptional regulation of gene expression.
GEO Record: GSE25831 GSE25834 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00038180.ce.mr.csv (details)
21363964
Pferdehirt RR et al., 2013 9 SUMOylation is essential for sex-specific assembly and function of the Caenorhabditis elegans dosage compensation complex on X chromosomes.
GEO Record: GSE48347 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00044197.ce.mr.csv (details)
24043781
Phirke P et al., 2011 12 Transcriptional profiling of C. elegans DAF-19 uncovers a ciliary base-associated protein and a CDK/CCRK/LF2p-related kinase required for intraflagellar transport.
GEO Record: GSE25633 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00039866.ce.mr.csv (details)
21740898
Pietsch K et al., 2012 24 Meta-Analysis of Global Transcriptomics Suggests that Conserved Genetic Pathways are Responsible for Quercetin and Tannic Acid Mediated Longevity in C. elegans.
GEO Record: GSE35354 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00040963.ce.mr.csv (details)
22493606
Polyak E et al., 2018 75 N-acetylcysteine and vitamin E rescue animal longevity and cellular oxidative stress in pre-clinical models of mitochondrial complex I disease.
GEO Record: GSE66680 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00053833.ce.mr.csv (details)
29526616
Portman DS et al., 2004 1 Identification of C. elegans sensory ray genes using whole-genome expression profiling.
GEO Record: GSE3979 Platform: GPL2646 GPL3308 GPL3309
Download gene-centric, log2 transformed data: WBPaper00013489.ce.mr.csv (details)
15183729
Pujol N et al., 2008 12 Anti-fungal innate immunity in C. elegans is enhanced by evolutionary diversification of antimicrobial peptides.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00032031_2.ce.mr.csv (details)
18636113
Pujol N et al., 2008 32 Anti-fungal innate immunity in C. elegans is enhanced by evolutionary diversification of antimicrobial peptides.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00032031.ce.mr.csv (details)
18636113
Pukkila-Worley R et al., 2011 9 Candida albicans infection of Caenorhabditis elegans induces antifungal immune defenses.
GEO Record: GSE27401 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00039851.ce.mr.csv (details)
21731485
Pukkila-Worley R et al., 2012 6 Stimulation of host immune defenses by a small molecule protects C. elegans from bacterial infection.
GEO Record: GSE37266 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00041211.ce.mr.csv (details)
22719261
Quach TK et al., 2013 9 Genome-wide microarrray analysis reveals roles for the REF-1 family member HLH-29 in ferritin synthesis and peroxide stress response.
GEO Record: GSE65417 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00042178.ce.mr.csv (details)
23533643
Rae R et al., 2012 7 Genome-wide analysis of germline signaling genes regulating longevity and innate immunity in the nematode Pristionchus pacificus.
GEO Record: GSE37331 GSE37337 Platform: GPL14372
Download gene-centric, log2 transformed data: WBPaper00041466.ppa.mr.csv (details)
22912581
Rajagopal A et al., 2008 9 Haem homeostasis is regulated by the conserved and concerted functions of HRG-1 proteins.
GEO Record: GSE8696 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00031703.ce.mr.csv (details)
18418376
Rechtsteiner A et al., 2010 4 The histone H3K36 methyltransferase MES-4 acts epigenetically to transmit the memory of germline gene expression to progeny.
GEO Record: GSE58759 Platform: GPL18856
Download gene-centric, log2 transformed data: WBPaper00037131.ce.mr.csv (details)
20824077
Reichert K et al., 2005 12 Expression profiling of five different xenobiotics using a Caenorhabditis elegans whole genome microarray.
GEO Record: GSE4111 Platform: GPL2646 GPL2655 GPL2766 GPL3097 GPL3396
Download gene-centric, log2 transformed data: WBPaper00026820.ce.mr.csv (details)
16168746