SPELL - Nematode - Dataset Listing
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SPELL Version 2.0.3

Publication Num.
Conditions
Brief Description PubMed ID
Mertenskotter A et al., 2013 2 The p38 MAPK PMK-1 shows heat-induced nuclear translocation, supports chaperone expression, and affects the heat tolerance of Caenorhabditis elegans.
GEO Record: GSE41205 Platform: GPL13657
Download gene-centric, log2 transformed data: WBPaper00041697.ce.rs.csv (details)
23117578
Meyer JN et al., 2007 8 Decline of nucleotide excision repair capacity in aging Caenorhabditis elegans.
GEO Record: GSE4766 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00029334.ce.mr.csv (details)
17472752
Mikl M et al., 2014 8 Alternative 3' UTR selection controls PAR-5 homeostasis and cell polarity in C. elegans embryos.
GEO Record: GSE59705 Platform: GPL13776
Download gene-centric, log2 transformed data: WBPaper00045705.ce.rs.csv (details)
25199833
Mikolas P et al., 2013 6 GEI-8, a homologue of vertebrate nuclear receptor corepressor NCoR/SMRT, regulates gonad development and neuronal functions in Caenorhabditis elegans.
GEO Record: GSE40127 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00042128.ce.mr.csv (details)
23484030
Miller EV et al., 2015 12 The Conserved G-Protein Coupled Receptor FSHR-1 Regulates Protective Host Responses to Infection and Oxidative Stress.
GEO Record: GSE72029 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00048530.ce.mr.csv (details)
26360906
Mongkoldhumrongkul N et al., 2010 3 Bio-electrospraying the nematode Caenorhabditis elegans: studying whole-genome transcriptional responses and key life cycle parameters.
GEO Record: GSE16915 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00035227.ce.mr.csv (details)
19776148
Morgan PG et al., 2015 4 Comparison of proteomic and metabolomic profiles of mutants of the mitochondrial respiratory chain in Caenorhabditis elegans.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00046217.ce.ms.csv (details)
25530493
Mortazavi A et al., 2010 2 Scaffolding a Caenorhabditis nematode genome with RNA-seq.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00037732.ce.rs.csv (details)
20980554
Mueller MM et al., 2014 15 DAF-16/FOXO and EGL-27/GATA promote developmental growth in response to persistent somatic DNA damage.
GEO Record: GSE47778 GSE51161 GSE51162 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00047070_1.ce.mr.csv (details)
25419847
Mueller MM et al., 2014 36 DAF-16/FOXO and EGL-27/GATA promote developmental growth in response to persistent somatic DNA damage.
GEO Record: GSE47778 GSE51161 GSE51162 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00047070_2.ce.mr.csv (details)
25419847
Murphy CT et al., 2003 60 Genes that act downstream of DAF-16 to influence the lifespan of Caenorhabditis elegans.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00005976.ce.mr.csv (details)
12845331
N.A. et al., 0 12 N.A.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper01000000.ovo.rs.csv (details)
0
Nargund AM et al., 2012 12 Mitochondrial import efficiency of ATFS-1 regulates mitochondrial UPR activation.
GEO Record: GSE38196 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00041370.ce.mr.csv (details)
22700657
Navarro-Herrera D et al., 2018 12 Dihomo-gamma-linolenic acid induces fat loss in C. elegans in an omega-3-independent manner by promoting peroxisomal fatty acid -oxidation.
GEO Record: GSE102802 Platform: GPL19230
Download gene-centric, log2 transformed data: WBPaper00053736.ce.mr.csv (details)
29465730
Nie Y et al., 2017 2 Proanthocyanidin trimer gallate modulates lipid deposition and fatty acid desaturation in Caenorhabditis elegans.
GEO Record: GSE81854 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00052845.ce.mr.csv (details)
28760744
Noble D et al., 2016 40 Genomic Analyses of Sperm Fate Regulator Targets Reveal a Common Set of Oogenic mRNAs in Caenorhabditis elegans.
GEO Record: GSE73070 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00048762.ce.mr.csv (details)
26564160
Noble LM et al., 2015 24 Natural Variation in plep-1 Causes Male-Male Copulatory Behavior in C.elegans.
GEO Record: GSE68351 Platform: GPL10094
Download gene-centric, log2 transformed data: WBPaper00048657.ce.mr.csv (details)
26455306
Norris AD et al., 2014 1 A pair of RNA-binding proteins controls networks of splicing events contributing to specialization of neural cell types.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00045350.ce.rs.csv (details)
24910101
Nousch M et al., 2014 9 The cytoplasmic poly(A) polymerases GLD-2 and GLD-4 promote general gene expression via distinct mechanisms.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00045729.ce.rs.csv (details)
25217583
O'Rourke D et al., 2006 6 Genomic clusters, putative pathogen recognition molecules, and antimicrobial genes are induced by infection of C. elegans with M. nematophilum.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00027722.ce.mr.csv (details)
16809667
Ortega-Cuellar D et al., 2010 5 Biotin starvation with adequate glucose provision causes paradoxical changes in fuel metabolism gene expression similar in rat (Rattus norvegicus), nematode (Caenorhabditis elegans) and yeast (Saccharomyces cerevisiae).
GEO Record: GSE18157 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00037086.ce.mr.csv (details)
20798549
Ortiz MA et al., 2014 16 A new dataset of spermatogenic vs. oogenic transcriptomes in the nematode Caenorhabditis elegans.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00045521.ce.rs.csv (details)
25060624
Osborne Nishimura E et al., 2015 6 Asymmetric transcript discovery by RNA-seq in C. elegans blastomeres identifies neg-1, a gene important for anterior morphogenesis.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00046691.ce.rs.csv (details)
25875092
Park SK et al., 2009 11 Oxidative stress and longevity in Caenorhabditis elegans as mediated by SKN-1.
GEO Record: GSE9301 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00034757.ce.mr.csv (details)
19627265
Passannante M et al., 2010 9 Different Mi-2 complexes for various developmental functions in Caenorhabditis elegans.
GEO Record: GSE21376 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00037765.ce.mr.csv (details)
21060680
Pathare PP et al., 2012 9 Coordinate regulation of lipid metabolism by novel nuclear receptor partnerships.
GEO Record: GSE34856 Platform: GPL9458
Download gene-centric, log2 transformed data: WBPaper00040998.ce.mr.csv (details)
22511885
Pauli F et al., 2006 8 Chromosomal clustering and GATA transcriptional regulation of intestine-expressed genes in C. elegans.
GEO Record: GSE4150 Platform: GPL2766 GPL3390 GPL3411
Download gene-centric, log2 transformed data: WBPaper00026980.ce.mr.csv (details)
16354718
Petrella LN et al., 2011 12 synMuv B proteins antagonize germline fate in the intestine and ensure C. elegans survival.
GEO Record: GSE26825 GSE26824 GSE26823 Platform: GPL5859
Download gene-centric, log2 transformed data: WBPaper00038168.ce.mr.csv (details)
21343362
Pferdehirt RR et al., 2011 6 An MLL/COMPASS subunit functions in the C. elegans dosage compensation complex to target X chromosomes for transcriptional regulation of gene expression.
GEO Record: GSE25831 GSE25834 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00038180.ce.mr.csv (details)
21363964
Pferdehirt RR et al., 2013 9 SUMOylation is essential for sex-specific assembly and function of the Caenorhabditis elegans dosage compensation complex on X chromosomes.
GEO Record: GSE48347 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00044197.ce.mr.csv (details)
24043781