SPELL - Nematode - Dataset Listing
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Dataset Listing

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SPELL Version 2.0.3

Publication Num.
Conditions
Brief Description PubMed ID
Gaudet J et al., 2002 1 Regulation of organogenesis by the Caenorhabditis elegans FoxA protein PHA-4.
GEO Record: GSE3681 Platform: GPL3177 GPL3178
Download gene-centric, log2 transformed data: WBPaper00005056.ce.mr.csv (details)
11823633
Blumenthal T et al., 2002 1 A global analysis of Caenorhabditis elegans operons.
GEO Record: GSE2975 Platform: GPL2653 GPL2655
Download gene-centric, log2 transformed data: WBPaper00005303.ce.mr.csv (details)
12075352
Zhang Y et al., 2002 1 Identification of genes expressed in C. elegans touch receptor neurons.
GEO Record: GSE3121 Platform: GPL2646 GPL2754
Download gene-centric, log2 transformed data: WBPaper00005356.ce.mr.csv (details)
12124626
Portman DS et al., 2004 1 Identification of C. elegans sensory ray genes using whole-genome expression profiling.
GEO Record: GSE3979 Platform: GPL2646 GPL3308 GPL3309
Download gene-centric, log2 transformed data: WBPaper00013489.ce.mr.csv (details)
15183729
Saha S et al., 2016 1 Polar Positioning of Phase-Separated Liquid Compartments in Cells Regulated by an mRNA Competition Mechanism.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00050091.ce.ms.csv (details)
27594427
Shin H et al., 2008 1 Transcriptome analysis for Caenorhabditis elegans based on novel expressed sequence tags.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00032006.ce.rs.csv (details)
18611272
Ma X et al., 2014 1 Characterisation of Caenorhabditis elegans sperm transcriptome and proteome.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00044954.ce.rs.csv (details)
24581041
Norris AD et al., 2014 1 A pair of RNA-binding proteins controls networks of splicing events contributing to specialization of neural cell types.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00045350.ce.rs.csv (details)
24910101
Jo H et al., 2009 1 IRE-1 and HSP-4 contribute to energy homeostasis via fasting-induced lipases in C. elegans.
GEO Record: GSE15656 Platform: GPL7272
Download gene-centric, log2 transformed data: WBPaper00033126.ce.mr.csv (details)
19416714
Tepper RG et al., 2013 1 PQM-1 complements DAF-16 as a key transcriptional regulator of DAF-2-mediated development and longevity.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00044005.ce.mr.csv (details)
23911329
Uyar B et al., 2012 2 RNA-seq analysis of the C. briggsae transcriptome.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00041271.cbg.rs.csv (details)
22772596
Urano F et al., 2002 2 A survival pathway for Caenorhabditis elegans with a blocked unfolded protein response.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00005432.ce.mr.csv (details)
12186849
Bishop T et al., 2004 2 Genetic analysis of pathways regulated by the von Hippel-Lindau tumor suppressor in Caenorhabditis elegans.
GEO Record: GSE2963 Platform: GPL2646 GPL2647
Download gene-centric, log2 transformed data: WBPaper00024375.ce.mr.csv (details)
15361934
Roh JY et al., 2009 2 Ecotoxicity of silver nanoparticles on the soil nematode Caenorhabditis elegans using functional ecotoxicogenomics.
GEO Record: GSE14932 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00034661.ce.mr.csv (details)
19544910
Vrablik TL et al., 2015 2 Lipidomic and proteomic analysis of Caenorhabditis elegans lipid droplets and identification of ACS-4 as a lipid droplet-associated protein.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00046981.ce.ms.csv (details)
26121959
Mortazavi A et al., 2010 2 Scaffolding a Caenorhabditis nematode genome with RNA-seq.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00037732.ce.rs.csv (details)
20980554
Mertenskotter A et al., 2013 2 The p38 MAPK PMK-1 shows heat-induced nuclear translocation, supports chaperone expression, and affects the heat tolerance of Caenorhabditis elegans.
GEO Record: GSE41205 Platform: GPL13657
Download gene-centric, log2 transformed data: WBPaper00041697.ce.rs.csv (details)
23117578
Schwarz EM et al., 2015 2 The genome and transcriptome of the zoonotic hookworm Ancylostoma ceylanicum identify infection-specific gene families.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00046511.ce.rs.csv (details)
25730766
Campbell AC et al., 2015 2 CSR-1 and P granules suppress sperm-specific transcription in the C. elegans germline.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00046805.ce.rs.csv (details)
25968310
Chen PH et al., 2013 2 Molecular characterization of toxicity mechanism of single-walled carbon nanotubes.
GEO Record: GSE41486 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00042331.ce.mr.csv (details)
23623425
Borchert N et al., 2010 2 Proteogenomics of Pristionchus pacificus reveals distinct proteome structure of nematode models.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00036038.ppa.rs.csv (details)
20237107
Nie Y et al., 2017 2 Proanthocyanidin trimer gallate modulates lipid deposition and fatty acid desaturation in Caenorhabditis elegans.
GEO Record: GSE81854 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00052845.ce.mr.csv (details)
28760744
Hu CC et al., 2018 2 Uptake of TiO2 Nanoparticles into C. elegans Neurons Negatively Affects Axonal Growth and Worm Locomotion Behavior.
GEO Record: GSE95603 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00053737.ce.mr.csv (details)
29464946
Gaglia MM et al., 2012 3 Genes that act downstream of sensory neurons to influence longevity, dauer formation, and pathogen responses in Caenorhabditis elegans.
GEO Record: GSE41943 Platform: GPL9450
Download gene-centric, log2 transformed data: WBPaper00041876.ce.mr.csv (details)
23284299
Link CD et al., 2003 3 Gene expression analysis in a transgenic Caenorhabditis elegans Alzheimer's disease model.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00005751.ce.mr.csv (details)
12600716
Whetstine JR et al., 2005 3 Regulation of tissue-specific and extracellular matrix-related genes by a class I histone deacetylase.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00025192.ce.mr.csv (details)
15893731
Liu T et al., 2004 3 Regulation of signaling genes by TGFbeta during entry into dauer diapause in C. elegans.
GEO Record: GSE4164 Platform: GPL2646 GPL2653 GPL2754 GPL3178
Download gene-centric, log2 transformed data: WBPaper00024393.ce.mr.csv (details)
15380030
Menzel R et al., 2001 3 A systematic gene expression screen of Caenorhabditis elegans cytochrome P450 genes reveals CYP35 as strongly xenobiotic inducible.
GEO Record: GSE3680 Platform: GPL2646 GPL2655 GPL3097
Download gene-centric, log2 transformed data: WBPaper00004966.ce.mr.csv (details)
11697852
Shen C et al., 2005 3 Roles of the HIF-1 hypoxia-inducible factor during hypoxia response in Caenorhabditis elegans.
GEO Record: GSE2836 Platform: GPL2569
Download gene-centric, log2 transformed data: WBPaper00026596.ce.mr.csv (details)
15781453
Szewczyk NJ et al., 2006 3 Delayed development and lifespan extension as features of metabolic lifestyle alteration in C. elegans under dietary restriction.
GEO Record: GSE6057 Platform: GPL3411
Download gene-centric, log2 transformed data: WBPaper00028564.ce.mr.csv (details)
17023606