SPELL - Nematode - Dataset Listing
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SPELL Version 2.0.3

Publication Num.
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Brief Description PubMed ID
VenkataKrishna LM et al., 2023 18 Cronobacter sakazakii infection implicates multifaceted neuro-immune regulatory pathways of Caenorhabditis elegans.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00066328.ce.ms.csv (details)
37818754
Binti S et al., 2024 8 A conserved protein tyrosine phosphatase, PTPN-22, functions in diverse developmental processes in C. elegans.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00067175.ce.ms.csv (details)
39173071
Podraza-Farhanieh A et al., 2023 8 A proinsulin-dependent interaction between ENPL-1 and ASNA-1 in neurons is required to maintain insulin secretion in C. elegans.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00065132.ce.ms.csv (details)
36939052
Morgan PG et al., 2015 4 Comparison of proteomic and metabolomic profiles of mutants of the mitochondrial respiratory chain in Caenorhabditis elegans.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00046217.ce.ms.csv (details)
25530493
Matia-Gonzalez AM et al., 2015 9 Conserved mRNA-binding proteomes in eukaryotic organisms.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00048910.ce.ms.csv (details)
26595419
Lesnik C et al., 2024 12 Enhanced branched-chain amino acid metabolism improves age-related reproduction in C. elegans.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00066547.ce.ms.csv (details)
38418585
Dubey AA et al., 2024 8 Floxuridine supports UPS independent of germline signaling and proteostasis regulators via involvement of detoxification in C. elegans.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00067340.ce.ms.csv (details)
39083540
Larance M et al., 2015 5 Global Proteomics Analysis of the Response to Starvation in C. elegans.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00046795.ce.ms.csv (details)
25963834
Thapa P et al., 2024 16 HSP70 inhibits CHIP E3 ligase activity to maintain germline function in Caenorhabditis elegans
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00067432.ce.ms.csv (details)
39384041
Geillinger KE et al., 2014 14 Intestinal amino acid availability via PEPT-1 affects TORC1/2 signaling and the unfolded protein response.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00045460.ce.ms.csv (details)
24999909
Vrablik TL et al., 2015 2 Lipidomic and proteomic analysis of Caenorhabditis elegans lipid droplets and identification of ACS-4 as a lipid droplet-associated protein.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00046981.ce.ms.csv (details)
26121959
Huang S et al., 2024 4 MACSPI enables tissue-selective proteomic and interactomic analyses in multicellular organisms.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00066799.ce.ms.csv (details)
38753516
Schmeisser K et al., 2024 12 Mobilization of cholesterol induces the transition from quiescence to growth in Caenorhabditis elegans through steroid hormone and mTOR signaling.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00066417.ce.ms.csv (details)
38267699
Harvald EB et al., 2017 42 Multi-omics Analyses of Starvation Responses Reveal a Central Role for Lipoprotein Metabolism in Acute Starvation Survival in C.elegans.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00051532.ce.ms.csv (details)
28734827
Rhoads TW et al., 2015 9 NeuCode Labeling in Nematodes: Proteomic and Phosphoproteomic Impact of Ascaroside Treatment in Caenorhabditis elegans.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00048573.ce.ms.csv (details)
26392051
Saha S et al., 2016 1 Polar Positioning of Phase-Separated Liquid Compartments in Cells Regulated by an mRNA Competition Mechanism.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00050091.ce.ms.csv (details)
27594427
Depuydt G et al., 2013 15 Reduced insulin/insulin-like growth factor-1 signaling and dietary restriction inhibit translation but preserve muscle mass in Caenorhabditis elegans.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00044128.ce.ms.csv (details)
24002365
Sharifi S et al., 2024 45 Reducing the metabolic burden of rRNA synthesis promotes healthy longevity in Caenorhabditis elegans.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00066531.ce.ms.csv (details)
38402241
Tan CH et al., 2024 6 Single-tissue proteomics in Caenorhabditis elegans reveals proteins resident in intestinal lysosome-related organelles.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00066880.ce.ms.csv (details)
38861598
Pees B et al., 2024 12 The Caenorhabditis elegans proteome response to two protective Pseudomonas symbionts.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00066632.ce.ms.csv (details)
38411078
Hunt VL et al., 2016 12 The genomic basis of parasitism in the Strongyloides clade of nematodes.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00050919.ce.ms.csv (details)
26829753
Franziscus CA et al., 2024 8 The protein tyrosine phosphatase PPH-7 is required for fertility and embryonic development in C. elegans at elevated temperatures.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00066469.ce.ms.csv (details)
38320757
Choi YJ et al., 2011 14 A deep sequencing approach to comparatively analyze the transcriptome of lifecycle stages of the filarial worm, Brugia malayi.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00042241.bma.rs.csv (details)
22180794
Ortiz MA et al., 2014 16 A new dataset of spermatogenic vs. oogenic transcriptomes in the nematode Caenorhabditis elegans.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00045521.ce.rs.csv (details)
25060624
Norris AD et al., 2014 1 A pair of RNA-binding proteins controls networks of splicing events contributing to specialization of neural cell types.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00045350.ce.rs.csv (details)
24910101
Mikl M et al., 2014 8 Alternative 3' UTR selection controls PAR-5 homeostasis and cell polarity in C. elegans embryos.
GEO Record: GSE59705 Platform: GPL13776
Download gene-centric, log2 transformed data: WBPaper00045705.ce.rs.csv (details)
25199833
Conine CC et al., 2013 4 Argonautes promote male fertility and provide a paternal memory of germline gene expression in C. elegans.
GEO Record: GSE49672 Platform: GPL13776
Download gene-centric, log2 transformed data: WBPaper00044616.ce.rs.csv (details)
24360276
Osborne Nishimura E et al., 2015 6 Asymmetric transcript discovery by RNA-seq in C. elegans blastomeres identifies neg-1, a gene important for anterior morphogenesis.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00046691.ce.rs.csv (details)
25875092
Gusarov I et al., 2013 4 Bacterial nitric oxide extends the lifespan of C. elegans.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00042034.ce.rs.csv (details)
23415229
Ma X et al., 2014 1 Characterisation of Caenorhabditis elegans sperm transcriptome and proteome.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00044954.ce.rs.csv (details)
24581041