SPELL - Nematode - Dataset Listing
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SPELL Version 2.0.3

Publication Num.
Conditions
Brief Description PubMed ID
Denver DR et al., 2005 49 The transcriptional consequences of mutation and natural selection in Caenorhabditis elegans.
GEO Record: GSE4123 Platform: GPL2646 GPL2766 GPL3096 GPL3097 GPL3098 GPL3178 GPL3399
Download gene-centric, log2 transformed data: WBPaper00025099.ce.mr.csv (details)
15852004
Depuydt G et al., 2013 15 Reduced insulin/insulin-like growth factor-1 signaling and dietary restriction inhibit translation but preserve muscle mass in Caenorhabditis elegans.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00044128.ce.ms.csv (details)
24002365
Derry WB et al., 2007 6 Regulation of developmental rate and germ cell proliferation in Caenorhabditis elegans by the p53 gene network.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00028948.ce.mr.csv (details)
17186023
Dillman AR et al., 2015 8 Comparative genomics of Steinernema reveals deeply conserved gene regulatory networks.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00050230.ce.rs.csv (details)
26392177
Ding W et al., 2015 12 s-Adenosylmethionine Levels Govern Innate Immunity through Distinct Methylation-Dependent Pathways.
GEO Record: GSE70692 Platform: GPL19230
Download gene-centric, log2 transformed data: WBPaper00048490.ce.mr.csv (details)
26321661
Dinkova TD et al., 2005 18 Translation of a small subset of Caenorhabditis elegans mRNAs is dependent on a specific eukaryotic translation initiation factor 4E isoform.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00024654.ce.mr.csv (details)
15601834
Dubey AA et al., 2024 8 Floxuridine supports UPS independent of germline signaling and proteostasis regulators via involvement of detoxification in C. elegans.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00067340.ce.ms.csv (details)
39083540
Dybbs M et al., 2005 9 Using microarrays to facilitate positional cloning: identification of tomosyn as an inhibitor of neurosecretion.
GEO Record: GSE2210 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00026714.ce.mr.csv (details)
16103915
Eckl J et al., 2017 6 Hsp90-downregulation influences the heat-shock response, innate immune response and onset of oocyte development in nematodes.
GEO Record: GSE105030 Platform: GPL19230
Download gene-centric, log2 transformed data: WBPaper00053254.ce.mr.csv (details)
29078207
Eckley DM et al., 2017 24 Transcriptome States Reflect Imaging of Aging States.
GEO Record: GSE92588 Platform: GPL10094
Download gene-centric, log2 transformed data: WBPaper00053427.ce.mr.csv (details)
29216338
Egge N et al., 2021 15 Trauma-induced regulation of VHP-1 modulates the cellular response to mechanical stress.
GEO Record: GSE148325 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00061115.ce.mr.csv (details)
33674585
El-Houjeiri L et al., 2019 8 The Transcription Factors TFEB and TFE3 Link the FLCN-AMPK Signaling Axis to Innate Immune Response and Pathogen Resistance.
GEO Record: GSE128029 Platform: GPL11346
Download gene-centric, log2 transformed data: WBPaper00056471.ce.mr.csv (details)
30917316
Engstrom PG et al., 2013 3 Systematic evaluation of spliced alignment programs for RNA-seq data.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00045464.ce.rs.csv (details)
24185836
Eom HJ et al., 2014 5 Integrative assessment of benzene exposure to Caenorhabditis elegans using computational behavior and toxicogenomic analyses.
GEO Record: GSE24923 GSE23013 GSE24845 GSE24846 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00045374.ce.mr.csv (details)
24846693
Eom HJ et al., 2015 3 A systems toxicology approach on the mechanism of uptake and toxicity of MWCNT in Caenorhabditis elegans.
GEO Record: GSE24847 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00047021.ce.mr.csv (details)
26111764
Ercan S et al., 2009 9 The C. elegans dosage compensation complex propagates dynamically and independently of X chromosome sequence.
GEO Record: GSE16621 Platform: GPL8673
Download gene-centric, log2 transformed data: WBPaper00035408.ce.mr.csv (details)
19853451
Ercan S et al., 2011 7 High nucleosome occupancy is encoded at X-linked gene promoters in C. elegans.
GEO Record: GSE20136 Platform: GPL8673
Download gene-centric, log2 transformed data: WBPaper00037949.ce.mr.csv (details)
21177966
Erkut C et al., 2013 8 Molecular strategies of the Caenorhabditis elegans dauer larva to survive extreme desiccation.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00044578.ce.mr.csv (details)
24324795
Esse R et al., 2019 12 DOT1L complex suppresses transcription from enhancer elements and ectopic RNAi in Caenorhabditis elegans.
GEO Record: GSE115677 Platform: GPL19230
Download gene-centric, log2 transformed data: WBPaper00057029.ce.mr.csv (details)
31300558
Estes KA et al., 2010 12 bZIP transcription factor zip-2 mediates an early response to Pseudomonas aeruginosa infection in Caenorhabditis elegans.
GEO Record: GSE50513 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00035891.ce.mr.csv (details)
20133860
Etheridge T et al., 2011 6 The effectiveness of RNAi in Caenorhabditis elegans is maintained during spaceflight.
GEO Record: GSE27288 Platform: GPL13164
Download gene-centric, log2 transformed data: WBPaper00038519_2.ce.mr.csv (details)
21673804
Etheridge T et al., 2011 18 The effectiveness of RNAi in Caenorhabditis elegans is maintained during spaceflight.
GEO Record: GSE27288 Platform: GPL13164
Download gene-centric, log2 transformed data: WBPaper00038519.ce.mr.csv (details)
21673804
Evans EA et al., 2008 26 Pseudomonas aeruginosa suppresses host immunity by activating the DAF-2 insulin-like signaling pathway in Caenorhabditis elegans.
GEO Record: GSE13473 Platform: GPL7559 GPL7560 GPL7561 GPL7562
Download gene-centric, log2 transformed data: WBPaper00032276.ce.mr.csv (details)
18927620
Fajardo C et al., 2020 18 Ecotoxicogenomic analysis of stress induced on Caenorhabditis elegans in heavy metal contaminated soil after nZVI treatment.
GEO Record: GSE145995 Platform: GPL19230
Download gene-centric, log2 transformed data: WBPaper00061519.ce.mr.csv (details)
32957299
Falk MJ et al., 2008 20 Metabolic pathway profiling of mitochondrial respiratory chain mutants in C. elegans.
GEO Record: GSE9896 GSE9897 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00031379.ce.mr.csv (details)
18178500
Fang EF et al., 2017 7 Tomatidine enhances lifespan and healthspan in C. elegans through mitophagy induction via the SKN-1/Nrf2 pathway.
GEO Record: GSE85237 Platform: GPL10094
Download gene-centric, log2 transformed data: WBPaper00051079.ce.mr.csv (details)
28397803
Fang EF et al., 2016 48 NAD(+) Replenishment Improves Lifespan and Healthspan in Ataxia Telangiectasia Models via Mitophagy and DNA Repair.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00051555.ce.mr.csv (details)
27732836
Fang EF et al., 2019 32 NAD+ augmentation restores mitophagy and limits accelerated aging in Werner syndrome.
GEO Record: GSE108968 Platform: GPL10094
Download gene-centric, log2 transformed data: WBPaper00058882.ce.mr.csv (details)
31754102
Feng D et al., 2024 24 Whole genome profiling of short-term hypoxia induced genes and identification of HIF-1 binding sites provide insights into HIF-1 function in Caenorhabditis elegans.
GEO Record: GSE228851 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00066920.ce.mr.csv (details)
38743782
Fensgard O et al., 2010 9 A two-tiered compensatory response to loss of DNA repair modulates aging and stress response pathways.
GEO Record: GSE16405 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00036135.ce.mr.csv (details)
20382984