SPELL - Nematode - Dataset Listing
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SPELL Version 2.0.3

Publication Num.
Conditions
Brief Description PubMed ID
Rae R et al., 2012 7 Genome-wide analysis of germline signaling genes regulating longevity and innate immunity in the nematode Pristionchus pacificus.
GEO Record: GSE37331 GSE37337 Platform: GPL14372
Download gene-centric, log2 transformed data: WBPaper00041466.ppa.mr.csv (details)
22912581
Schwarz EM et al., 2012 20 Functional transcriptomics of a migrating cell in Caenorhabditis elegans.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00041549.ce.rs.csv (details)
22991463
Studencka M et al., 2012 8 Transcriptional repression of Hox genes by C. elegans HP1/HPL and H1/HIS-24.
GEO Record: GSE33339 Platform: GPL7727
Download gene-centric, log2 transformed data: WBPaper00041609.ce.mr.csv (details)
23028351
Sinha A et al., 2012 15 System wide analysis of the evolution of innate immunity in the nematode model species Caenorhabditis elegans and Pristionchus pacificus.
GEO Record: GSE36517 GSE36519 GSE36521 GSE36523 GSE36636 Platform: GPL14372
Download gene-centric, log2 transformed data: WBPaper00041606.ce.mr.csv (details)
23028509
Sinha A et al., 2012 15 System wide analysis of the evolution of innate immunity in the nematode model species Caenorhabditis elegans and Pristionchus pacificus.
GEO Record: GSE36517 GSE36519 GSE36521 GSE36523 GSE36636 Platform: GPL14372
Download gene-centric, log2 transformed data: WBPaper00041606.ppa.mr.csv (details)
23028509
Gaydos LJ et al., 2012 12 Antagonism between MES-4 and Polycomb repressive complex 2 promotes appropriate gene expression in C. elegans germ cells.
GEO Record: GSE38158 GSE38160 Platform: GPL5883
Download gene-centric, log2 transformed data: WBPaper00041688.ce.mr.csv (details)
23103171
Thomas CG et al., 2012 6 Simplification and desexualization of gene expression in self-fertile nematodes.
GEO Record: GSE41367 Platform: GPL13776 GPL13657 GPL13776 GPL16135 GPL16136 GPL16137 GPL16138 GPL16139 GPL16140 GPL16141
Download gene-centric, log2 transformed data: WBPaper00041689.ce.rs.csv (details)
23103191
Mertenskotter A et al., 2013 2 The p38 MAPK PMK-1 shows heat-induced nuclear translocation, supports chaperone expression, and affects the heat tolerance of Caenorhabditis elegans.
GEO Record: GSE41205 Platform: GPL13657
Download gene-centric, log2 transformed data: WBPaper00041697.ce.rs.csv (details)
23117578
Gaglia MM et al., 2012 3 Genes that act downstream of sensory neurons to influence longevity, dauer formation, and pathogen responses in Caenorhabditis elegans.
GEO Record: GSE41943 Platform: GPL9450
Download gene-centric, log2 transformed data: WBPaper00041876.ce.mr.csv (details)
23284299
Grompone G et al., 2012 18 Anti-inflammatory Lactobacillus rhamnosus CNCM I-3690 strain protects against oxidative stress and increases lifespan in Caenorhabditis elegans.
GEO Record: GSE42192 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00041906.ce.mr.csv (details)
23300685
Uno M et al., 2013 56 A fasting-responsive signaling pathway that extends life span in C. elegans.
GEO Record: GSE27677 GSE42689 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00041960.ce.mr.csv (details)
23352664
Leung MC et al., 2013 69 Effects of early life exposure to ultraviolet C radiation on mitochondrial DNA content, transcription, ATP production, and oxygen consumption in developing Caenorhabditis elegans.
GEO Record: GSE38997 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00041939.ce.mr.csv (details)
23374645
Gusarov I et al., 2013 4 Bacterial nitric oxide extends the lifespan of C. elegans.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00042034.ce.rs.csv (details)
23415229
Hattori A et al., 2013 4 The Caenorhabditis elegans JNK signaling pathway activates expression of stress response genes by derepressing the Fos/HDAC repressor complex.
GEO Record: GSE42703 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00042067.ce.mr.csv (details)
23437011
Mikolas P et al., 2013 6 GEI-8, a homologue of vertebrate nuclear receptor corepressor NCoR/SMRT, regulates gonad development and neuronal functions in Caenorhabditis elegans.
GEO Record: GSE40127 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00042128.ce.mr.csv (details)
23484030
Quach TK et al., 2013 9 Genome-wide microarrray analysis reveals roles for the REF-1 family member HLH-29 in ferritin synthesis and peroxide stress response.
GEO Record: GSE65417 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00042178.ce.mr.csv (details)
23533643
Schmeisser S et al., 2013 4 Mitochondrial hormesis links low-dose arsenite exposure to lifespan extension.
GEO Record: GSE46257 Platform: GPL13776
Download gene-centric, log2 transformed data: WBPaper00042179.ce.rs.csv (details)
23534459
MacNeil LT et al., 2013 18 Diet-induced developmental acceleration independent of TOR and insulin in C. elegans.
GEO Record: GSE43959 GSE43953 GSE43954 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00042258.ce.mr.csv (details)
23540701
Watson E et al., 2013 9 Integration of metabolic and gene regulatory networks modulates the C. elegans dietary response.
GEO Record: GSE43952 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00042204.ce.mr.csv (details)
23540702
Gharbi H et al., 2013 6 Loss of the Birt-Hogg-Dube gene product folliculin induces longevity in a hypoxia-inducible factor-dependent manner.
GEO Record: GSE43207 Platform: GPL11346
Download gene-centric, log2 transformed data: WBPaper00042236.ce.mr.csv (details)
23566034
Arczewska KD et al., 2013 10 Active transcriptomic and proteomic reprogramming in the C. elegans nucleotide excision repair mutant xpa-1.
GEO Record: GSE39252 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00042234.ce.mr.csv (details)
23580547
Riedel CG et al., 2013 8 DAF-16 employs the chromatin remodeller SWI/SNF to promote stress resistance and longevity.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00042296.ce.rs.csv (details)
23604319
Chen PH et al., 2013 2 Molecular characterization of toxicity mechanism of single-walled carbon nanotubes.
GEO Record: GSE41486 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00042331.ce.mr.csv (details)
23623425
Lewis JA et al., 2013 146 Alterations in gene expression in Caenorhabditis elegans associated with organophosphate pesticide intoxication and recovery.
GEO Record: GSE41366 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00042340.ce.mr.csv (details)
23631360
Tamayo JV et al., 2013 26 Functional transcriptomic analysis of the role of MAB-5/Hox in Q neuroblast migration in Caenorhabditis elegans.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00042361.ce.rs.csv (details)
23642123
Cui M et al., 2013 6 The tumor suppressor Rb critically regulates starvation-induced stress response in C. elegans.
GEO Record: GSE45651 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00048637.ce.mr.csv (details)
23664972
Martorell P et al., 2013 7 A cocoa peptide protects Caenorhabditis elegans from oxidative stress and -amyloid peptide toxicity.
GEO Record: GSE44318 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00042404.ce.mr.csv (details)
23675471
Sarkies P et al., 2013 20 Competition between virus-derived and endogenous small RNAs regulates gene expression in Caenorhabditis elegans.
GEO Record: GSE41056 GSE41058 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00042574.ce.mr.csv (details)
23811144
Than MT et al., 2013 4 Functional analysis of neuronal microRNAs in Caenorhabditis elegans dauer formation by combinational genetics and Neuronal miRISC immunoprecipitation.
GEO Record: GSE45871 Platform: GPL5883
Download gene-centric, log2 transformed data: WBPaper00042548.ce.mr.csv (details)
23818874
Sahu SN et al., 2013 9 Genomic analysis of stress response against arsenic in Caenorhabditis elegans.
GEO Record: GSE39012 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00043980.ce.mr.csv (details)
23894281