SPELL - Nematode - Dataset Listing
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Dataset Listing

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SPELL Version 2.0.3

Publication Num.
Conditions
Brief Description PubMed ID
Sinha A et al., 2012 7 Divergent gene expression in the conserved dauer stage of the nematodes Pristionchus pacificus and Caenorhabditis elegans.
GEO Record: GSE31861 GSE36644 Platform: GPL14372
Download gene-centric, log2 transformed data: WBPaper00041207.ppa.mr.csv (details)
22712530
Rae R et al., 2012 7 Genome-wide analysis of germline signaling genes regulating longevity and innate immunity in the nematode Pristionchus pacificus.
GEO Record: GSE37331 GSE37337 Platform: GPL14372
Download gene-centric, log2 transformed data: WBPaper00041466.ppa.mr.csv (details)
22912581
Erkut C et al., 2013 8 Molecular strategies of the Caenorhabditis elegans dauer larva to survive extreme desiccation.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00044578.ce.mr.csv (details)
24324795
Gamerdinger M et al., 2015 8 The principle of antagonism ensures protein targeting specificity at the endoplasmic reticulum.
GEO Record: GSE63928 Platform: GPL19516
Download gene-centric, log2 transformed data: WBPaper00046643.ce.mr.csv (details)
25859040
Grants JM et al., 2015 8 The Mediator Kinase Module Restrains Epidermal Growth Factor Receptor Signaling and Represses Vulval Cell Fate Specification in Caenorhabditis elegans.
GEO Record: GSE68520 Platform: GPL11346
Download gene-centric, log2 transformed data: WBPaper00048990.ce.mr.csv (details)
26715664
Hill AA et al., 2000 8 Genomic analysis of gene expression in C. elegans.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00004386.ce.mr.csv (details)
11052945
Andralojc KM et al., 2017 8 ELLI-1, a novel germline protein, modulates RNAi activity and P-granule accumulation in Caenorhabditis elegans.
GEO Record: GSE82322 Platform: GPL21109
Download gene-centric, log2 transformed data: WBPaper00050743.ce.mr.csv (details)
28182654
Liu YJ et al., 2019 8 Glycine promotes longevity in Caenorhabditis elegans in a methionine cycle-dependent fashion.
GEO Record: GSE117581 Platform: GPL21109
Download gene-centric, log2 transformed data: WBPaper00056330.ce.mr.csv (details)
30845140
El-Houjeiri L et al., 2019 8 The Transcription Factors TFEB and TFE3 Link the FLCN-AMPK Signaling Axis to Innate Immune Response and Pathogen Resistance.
GEO Record: GSE128029 Platform: GPL11346
Download gene-centric, log2 transformed data: WBPaper00056471.ce.mr.csv (details)
30917316
Bai X et al., 2020 8 Loss of the seipin gene perturbs eggshell formation in C. elegans.
GEO Record: GSE157800 Platform: GPL11346
Download gene-centric, log2 transformed data: WBPaper00060122.ce.mr.csv (details)
32820022
Huang Y et al., 2021 8 Heat Stress Reduces the Susceptibility of Caenorhabditis elegans to Orsay Virus Infection.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00061877.ce.mr.csv (details)
34440335
Pauli F et al., 2006 8 Chromosomal clustering and GATA transcriptional regulation of intestine-expressed genes in C. elegans.
GEO Record: GSE4150 Platform: GPL2766 GPL3390 GPL3411
Download gene-centric, log2 transformed data: WBPaper00026980.ce.mr.csv (details)
16354718
Goh GYS et al., 2023 8 Mediator subunit MDT-15 promotes expression of propionic acid breakdown genes to prevent embryonic lethality in Caenorhabditis elegans.
GEO Record: GSE220955 Platform: GPL11346
Download gene-centric, log2 transformed data: WBPaper00065288.ce.mr.csv (details)
37075089
Menzel R et al., 2007 8 Cytochrome P450s and short-chain dehydrogenases mediate the toxicogenomic response of PCB52 in the nematode Caenorhabditis elegans.
GEO Record: GSE7125 Platform: GPL4469
Download gene-centric, log2 transformed data: WBPaper00029387.ce.mr.csv (details)
17499272
Liang J et al., 2007 8 Transcriptional repressor and activator activities of SMA-9 contribute differentially to BMP-related signaling outputs.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00029226.ce.mr.csv (details)
17397820
Meyer JN et al., 2007 8 Decline of nucleotide excision repair capacity in aging Caenorhabditis elegans.
GEO Record: GSE4766 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00029334.ce.mr.csv (details)
17472752
Watson JD et al., 2008 8 Complementary RNA amplification methods enhance microarray identification of transcripts expressed in the C. elegans nervous system.
GEO Record: GSE9485 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00031532.ce.mr.csv (details)
18284693
Kershner AM et al., 2010 8 Genome-wide analysis of mRNA targets for Caenorhabditis elegans FBF, a conserved stem cell regulator.
GEO Record: GSE19922 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00035905.ce.mr.csv (details)
20142496
Ziegler K et al., 2009 8 Antifungal innate immunity in C. elegans: PKCdelta links G protein signaling and a conserved p38 MAPK cascade.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00033094.ce.mr.csv (details)
19380113
Zheng Q et al., 2011 8 Regulation of C. elegans presynaptic differentiation and neurite branching via a novel signaling pathway initiated by SAM-10.
GEO Record: GSE25285 Platform: GPL5859
Download gene-centric, log2 transformed data: WBPaper00037849.ce.mr.csv (details)
21115607
Huumonen K et al., 2012 8 Radiation-induced genomic instability in Caenorhabditis elegans.
GEO Record: GSE29979 Platform: GPL9458
Download gene-centric, log2 transformed data: WBPaper00041300.ce.mr.csv (details)
22796420
Podraza-Farhanieh A et al., 2023 8 A proinsulin-dependent interaction between ENPL-1 and ASNA-1 in neurons is required to maintain insulin secretion in C. elegans.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00065132.ce.ms.csv (details)
36939052
Riedel CG et al., 2013 8 DAF-16 employs the chromatin remodeller SWI/SNF to promote stress resistance and longevity.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00042296.ce.rs.csv (details)
23604319
Lans H et al., 2013 8 DNA damage leads to progressive replicative decline but extends the life span of long-lived mutant animals.
GEO Record: GSE39145 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00044163.ce.mr.csv (details)
24013725
Washburn MC et al., 2014 8 The dsRBP and inactive editor ADR-1 utilizes dsRNA binding to regulate A-to-I RNA editing across the C. elegans transcriptome.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00044827.ce.rs.csv (details)
24508457
Albritton SE et al., 2014 8 Sex-biased gene expression and evolution of the x chromosome in nematodes.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00045232.ce.rs.csv (details)
24793291
Stoeckius M et al., 2014 8 Global characterization of the oocyte-to-embryo transition in Caenorhabditis elegans uncovers a novel mRNA clearance mechanism.
GEO Record: GSE58141 Platform: GPL13776
Download gene-centric, log2 transformed data: WBPaper00045420.ce.rs.csv (details)
24957527
Gorrepati L et al., 2015 8 Identification of Wnt Pathway Target Genes Regulating the Division and Differentiation of Larval Seam Cells and Vulval Precursor Cells in Caenorhabditis elegans.
GEO Record: GSE52747 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00046887.ce.mr.csv (details)
26048561
Mikl M et al., 2014 8 Alternative 3' UTR selection controls PAR-5 homeostasis and cell polarity in C. elegans embryos.
GEO Record: GSE59705 Platform: GPL13776
Download gene-centric, log2 transformed data: WBPaper00045705.ce.rs.csv (details)
25199833
Dillman AR et al., 2015 8 Comparative genomics of Steinernema reveals deeply conserved gene regulatory networks.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00050230.ce.rs.csv (details)
26392177