SPELL - Nematode - Dataset Listing
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SPELL Version 2.0.3

Publication Num.
Conditions
Brief Description PubMed ID
Yanai I et al., 2009 16 Comparison of diverse developmental transcriptomes reveals that coexpression of gene neighbors is not evolutionarily conserved.
GEO Record: GSE15234 GSE15551 Platform: GPL8304 GPL8303
Download gene-centric, log2 transformed data: WBPaper00035187.ce.mr.csv (details)
19745112
Turek M et al., 2016 16 Sleep-active neuron specification and sleep induction require FLP-11 neuropeptides to systemically induce sleep.
GEO Record: GSE73282 GSE73283 Platform: GPL11346
Download gene-centric, log2 transformed data: WBPaper00049336.ce.mr.csv (details)
26949257
Stadler M et al., 2012 17 Contributions of mRNA abundance, ribosome loading, and post- or peri-translational effects to temporal repression of C. elegans heterochronic miRNA targets.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00041361.ce.rs.csv (details)
22855835
Luo S et al., 2010 17 TGF- and insulin signaling regulate reproductive aging via oocyte and germline quality maintenance.
GEO Record: GSE23446 GSE23447 GSE23448 GSE23509 Platform: GPL7727
Download gene-centric, log2 transformed data: WBPaper00037682.ce.mr.csv (details)
20946987
Reinke V et al., 2004 18 Genome-wide germline-enriched and sex-biased expression profiles in Caenorhabditis elegans.
GEO Record: GSE696 GSE715 GSE716 GSE717 GSE718 GSE719 GSE720 GSE721 GSE722 GSE723 GSE724 GSE725 GSE726 GSE727 GSE728 GSE729 GSE730 GSE731 GSE732 GSE733 GSE734 GSE735 GSE736 GSE737 Platform: GPL446 GPL539 GPL540
Download gene-centric, log2 transformed data: WBPaper00006390.ce.mr.csv (details)
14668411
Dinkova TD et al., 2005 18 Translation of a small subset of Caenorhabditis elegans mRNAs is dependent on a specific eukaryotic translation initiation factor 4E isoform.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00024654.ce.mr.csv (details)
15601834
Shapira M et al., 2006 18 A conserved role for a GATA transcription factor in regulating epithelial innate immune responses.
GEO Record: GSE5584 Platform: GPL4206 GPL4207 GPL4208
Download gene-centric, log2 transformed data: WBPaper00028482.ce.mr.csv (details)
16968778
Kirienko NV et al., 2007 18 Transcriptome profiling of the C. elegans Rb ortholog reveals diverse developmental roles.
GEO Record: GSE6547 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00029190.ce.mr.csv (details)
17368442
Baugh LR et al., 2009 18 RNA Pol II accumulates at promoters of growth genes during developmental arrest.
GEO Record: GSE11055 GSE14009 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00032948.ce.mr.csv (details)
19251593
Love DC et al., 2010 18 Dynamic O-GlcNAc cycling at promoters of Caenorhabditis elegans genes regulating longevity, stress, and immunity.
GEO Record: GSE18132 GSE18131 GSE18130 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00036090.ce.mr.csv (details)
20368426
Mabon ME et al., 2009 18 Divergent mechanisms controlling hypoxic sensitivity and lifespan by the DAF-2/insulin/IGF-receptor pathway.
GEO Record: GSE18601 Platform: GPL9458
Download gene-centric, log2 transformed data: WBPaper00035504.ce.mr.csv (details)
19936206
Vinuela A et al., 2010 18 Genome-wide gene expression analysis in response to organophosphorus pesticide chlorpyrifos and diazinon in C. elegans.
GEO Record: GSE16686 GSE16688 GSE16698 GSE16719 Platform: GPL4038
Download gene-centric, log2 transformed data: WBPaper00037113.ce.mr.csv (details)
20808445
Vinuela A et al., 2011 18 Gene expression modifications by temperature-toxicants interactions in Caenorhabditis elegans.
GEO Record: GSE24229 GSE24230 GSE24254 GSE24257 Platform: GPL4038
Download gene-centric, log2 transformed data: WBPaper00040210.ce.mr.csv (details)
21931806
Grompone G et al., 2012 18 Anti-inflammatory Lactobacillus rhamnosus CNCM I-3690 strain protects against oxidative stress and increases lifespan in Caenorhabditis elegans.
GEO Record: GSE42192 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00041906.ce.mr.csv (details)
23300685
MacNeil LT et al., 2013 18 Diet-induced developmental acceleration independent of TOR and insulin in C. elegans.
GEO Record: GSE43959 GSE43953 GSE43954 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00042258.ce.mr.csv (details)
23540701
Hummell NA et al., 2021 18 Novel Immune Modulators Enhance Caenorhabditis elegans Resistance to Multiple Pathogens.
GEO Record: GSE137516 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00060876.ce.mr.csv (details)
33408224
Fajardo C et al., 2020 18 Ecotoxicogenomic analysis of stress induced on Caenorhabditis elegans in heavy metal contaminated soil after nZVI treatment.
GEO Record: GSE145995 Platform: GPL19230
Download gene-centric, log2 transformed data: WBPaper00061519.ce.mr.csv (details)
32957299
Etheridge T et al., 2011 18 The effectiveness of RNAi in Caenorhabditis elegans is maintained during spaceflight.
GEO Record: GSE27288 Platform: GPL13164
Download gene-centric, log2 transformed data: WBPaper00038519.ce.mr.csv (details)
21673804
McElwee JJ et al., 2004 20 Shared transcriptional signature in Caenorhabditis elegans Dauer larvae and long-lived daf-2 mutants implicates detoxification system in longevity assurance.
GEO Record: GSE1762 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00024278.ce.mr.csv (details)
15308663
Falk MJ et al., 2008 20 Metabolic pathway profiling of mitochondrial respiratory chain mutants in C. elegans.
GEO Record: GSE9896 GSE9897 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00031379.ce.mr.csv (details)
18178500
Zhang L et al., 2007 20 Systematic identification of C. elegans miRISC proteins, miRNAs, and mRNA targets by their interactions with GW182 proteins AIN-1 and AIN-2.
GEO Record: GSE9073 Platform: GPL5883
Download gene-centric, log2 transformed data: WBPaper00031252.ce.mr.csv (details)
18042455
Laing ST et al., 2012 20 The transcriptional response of Caenorhabditis elegans to Ivermectin exposure identifies novel genes involved in the response to reduced food intake.
GEO Record: GSE22660 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00040808.ce.mr.csv (details)
22348077
Schwarz EM et al., 2012 20 Functional transcriptomics of a migrating cell in Caenorhabditis elegans.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00041549.ce.rs.csv (details)
22991463
Sarkies P et al., 2013 20 Competition between virus-derived and endogenous small RNAs regulates gene expression in Caenorhabditis elegans.
GEO Record: GSE41056 GSE41058 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00042574.ce.mr.csv (details)
23811144
Brinkmann V et al., 2022 20 Aryl Hydrocarbon Receptor-Dependent and -Independent Pathways Mediate Curcumin Anti-Aging Effects.
GEO Record: GSE195769 Platform: GPL19230
Download gene-centric, log2 transformed data: WBPaper00064073.ce.mr.csv (details)
35453298
Head BP et al., 2016 20 Role of GATA transcription factor ELT-2 and p38 MAPK PMK-1 in recovery from acute P. aeruginosa infection in C. elegans.
GEO Record: GSE81592 Platform: GPL11346
Download gene-centric, log2 transformed data: WBPaper00050096.ce.mr.csv (details)
27600703
Lee RC et al., 2006 21 Interacting endogenous and exogenous RNAi pathways in Caenorhabditis elegans.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00027111.ce.mr.csv (details)
16489184
Kim KW et al., 2010 21 GLD-2/RNP-8 cytoplasmic poly(A) polymerase is a broad-spectrum regulator of the oogenesis program.
GEO Record: GSE23843 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00037611.ce.mr.csv (details)
20855596
George-Raizen JB et al., 2014 21 Dynamically-expressed prion-like proteins form a cuticle in the pharynx of Caenorhabditis elegans.
GEO Record: GSE46291 GSE46288 GSE46289 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00045960.ce.mr.csv (details)
25361578
Tjahjono E et al., 2017 21 A conserved mitochondrial surveillance pathway is required for defense against Pseudomonas aeruginosa.
GEO Record: GSE55422 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00051448.ce.mr.csv (details)
28662060