SPELL - Nematode - Dataset Listing
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SPELL Version 2.0.3

Publication Num.
Conditions
Brief Description PubMed ID
Fensgard O et al., 2010 9 A two-tiered compensatory response to loss of DNA repair modulates aging and stress response pathways.
GEO Record: GSE16405 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00036135.ce.mr.csv (details)
20382984
Andersen EC et al., 2014 15 A variant in the neuropeptide receptor npr-1 is a major determinant of Caenorhabditis elegans growth and physiology.
GEO Record: GSE49307 Platform: GPL8209
Download gene-centric, log2 transformed data: WBPaper00044939.ce.mr.csv (details)
24586193
Arczewska KD et al., 2013 10 Active transcriptomic and proteomic reprogramming in the C. elegans nucleotide excision repair mutant xpa-1.
GEO Record: GSE39252 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00042234.ce.mr.csv (details)
23580547
Saul N et al., 2015 15 Adsorbable organic bromine compounds (AOBr) in aquatic samples: a nematode-based toxicogenomic assessment of the exposure hazard.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00046853.ce.mr.csv (details)
25994267
Golden TR et al., 2008 104 Age-related behaviors have distinct transcriptional profiles in Caenorhabditis elegans.
GEO Record: GSE12290 Platform: GPL5859
Download gene-centric, log2 transformed data: WBPaper00032165.ce.mr.csv (details)
18778409
Vinuela A et al., 2012 14 Aging Uncouples Heritability and Expression-QTL in Caenorhabditis elegans
GEO Record: GSE22887 Platform: GPL4038
Download gene-centric, log2 transformed data: WBPaper00040858.ce.mr.csv (details)
22670229
Lewis JA et al., 2013 146 Alterations in gene expression in Caenorhabditis elegans associated with organophosphate pesticide intoxication and recovery.
GEO Record: GSE41366 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00042340.ce.mr.csv (details)
23631360
Tanguy M et al., 2017 24 An Alternative STAT Signaling Pathway Acts in Viral Immunity in Caenorhabditis elegans.
GEO Record: GSE99586 Platform: GPL19230
Download gene-centric, log2 transformed data: WBPaper00053020.ce.mr.csv (details)
28874466
Budovskaya YV et al., 2008 4 An elt-3/elt-5/elt-6 GATA transcription circuit guides aging in C. elegans.
GEO Record: GSE12094 GSE12166 GSE12167 GSE12168 Platform: GPL7065 GPL7066 GPL7067 GPL7068
Download gene-centric, log2 transformed data: WBPaper00032062.ce.mr.csv (details)
18662544
De Stasio EA et al., 2018 14 An Expanded Role for the RFX Transcription Factor DAF-19, with Dual Functions in Ciliated and Non-ciliated Neurons.
GEO Record: GSE96068 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00053550.ce.mr.csv (details)
29301909
Pferdehirt RR et al., 2011 6 An MLL/COMPASS subunit functions in the C. elegans dosage compensation complex to target X chromosomes for transcriptional regulation of gene expression.
GEO Record: GSE25831 GSE25834 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00038180.ce.mr.csv (details)
21363964
Gaydos LJ et al., 2012 12 Antagonism between MES-4 and Polycomb repressive complex 2 promotes appropriate gene expression in C. elegans germ cells.
GEO Record: GSE38158 GSE38160 Platform: GPL5883
Download gene-centric, log2 transformed data: WBPaper00041688.ce.mr.csv (details)
23103171
Pujol N et al., 2008 32 Anti-fungal innate immunity in C. elegans is enhanced by evolutionary diversification of antimicrobial peptides.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00032031.ce.mr.csv (details)
18636113
Pujol N et al., 2008 12 Anti-fungal innate immunity in C. elegans is enhanced by evolutionary diversification of antimicrobial peptides.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00032031_2.ce.mr.csv (details)
18636113
Grompone G et al., 2012 18 Anti-inflammatory Lactobacillus rhamnosus CNCM I-3690 strain protects against oxidative stress and increases lifespan in Caenorhabditis elegans.
GEO Record: GSE42192 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00041906.ce.mr.csv (details)
23300685
Ziegler K et al., 2009 8 Antifungal innate immunity in C. elegans: PKCdelta links G protein signaling and a conserved p38 MAPK cascade.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00033094.ce.mr.csv (details)
19380113
Brinkmann V et al., 2022 20 Aryl Hydrocarbon Receptor-Dependent and -Independent Pathways Mediate Curcumin Anti-Aging Effects.
GEO Record: GSE195769 Platform: GPL19230
Download gene-centric, log2 transformed data: WBPaper00064073.ce.mr.csv (details)
35453298
Camacho J et al., 2022 16 Assessment of the effects of organic vs. inorganic arsenic and mercury in Caenorhabditis elegans.
GEO Record: GSE196891 Platform: GPL10094
Download gene-centric, log2 transformed data: WBPaper00064061.ce.mr.csv (details)
35602005
Mongkoldhumrongkul N et al., 2010 3 Bio-electrospraying the nematode Caenorhabditis elegans: studying whole-genome transcriptional responses and key life cycle parameters.
GEO Record: GSE16915 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00035227.ce.mr.csv (details)
19776148
Ortega-Cuellar D et al., 2010 5 Biotin starvation with adequate glucose provision causes paradoxical changes in fuel metabolism gene expression similar in rat (Rattus norvegicus), nematode (Caenorhabditis elegans) and yeast (Saccharomyces cerevisiae).
GEO Record: GSE18157 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00037086.ce.mr.csv (details)
20798549
Liby P et al., 2006 6 BIR-1, the homologue of human Survivin, regulates expression of developmentally active collagen genes in C. elegans.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00028809.ce.mr.csv (details)
17116281
Yuen GJ et al., 2018 13 Both live and dead Enterococci activate Caenorhabditis elegans host defense via immune and stress pathways.
GEO Record: GSE95636 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00053688.ce.mr.csv (details)
29436902
Lee SH et al., 2013 27 Burkholderia pseudomallei suppresses Caenorhabditis elegans immunity by specific degradation of a GATA transcription factor.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00044091.ce.mr.csv (details)
23980181
Estes KA et al., 2010 12 bZIP transcription factor zip-2 mediates an early response to Pseudomonas aeruginosa infection in Caenorhabditis elegans.
GEO Record: GSE50513 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00035891.ce.mr.csv (details)
20133860
Krajacic P et al., 2009 12 C. elegans dysferlin homolog fer-1 is expressed in muscle, and fer-1 mutations initiate altered gene expression of muscle enriched genes.
GEO Record: GSE16753 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00035197.ce.mr.csv (details)
19755517
Ji YJ et al., 2020 16 C9orf72/ALFA-1 controls TFEB/HLH-30-dependent metabolism through dynamic regulation ofrag GTPases.
GEO Record: GSE137355 Platform: GPL19230
Download gene-centric, log2 transformed data: WBPaper00059541.ce.mr.csv (details)
32282804
Custodia N et al., 2001 6 Caenorhabditis elegans as an environmental monitor using DNA microarray analysis.
GEO Record: GSE2970 Platform: GPL2652 GPL2653
Download gene-centric, log2 transformed data: WBPaper00005124.ce.mr.csv (details)
11795393
Korzelius J et al., 2011 15 Caenorhabditis elegans cyclin D/CDK4 and cyclin E/CDK2 induce distinct cell cycle re-entry programs in differentiated muscle cells.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00040426.ce.mr.csv (details)
22102824
Coolon JD et al., 2009 36 Caenorhabditis elegans genomic response to soil bacteria predicts environment-specific genetic effects on life history traits.
GEO Record: GSE15923 Platform: GPL5883
Download gene-centric, log2 transformed data: WBPaper00033444.ce.mr.csv (details)
19503598
Zhang T et al., 2012 6 Caenorhabditis elegans RNA-processing protein TDP-1 regulates protein homeostasis and life span.
GEO Record: GSE34113 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00040603.ce.mr.csv (details)
22232551