SPELL - Nematode - Dataset Listing
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Dataset Listing

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SPELL Version 2.0.3

Publication Num.
Conditions
Brief Description PubMed ID
Stadler M et al., 2011 16 Wobble base-pairing slows in vivo translation elongation in metazoans.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00040379.ce.rs.csv (details)
22045228
Studencka M et al., 2012 10 Novel roles of Caenorhabditis elegans heterochromatin protein HP1 and linker histone in the regulation of innate immune gene expression.
GEO Record: GSE25714 Platform: GPL7727
Download gene-centric, log2 transformed data: WBPaper00040410.ce.mr.csv (details)
22083954
Topalidou I et al., 2011 11 Shared gene expression in distinct neurons expressing common selector genes.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00040420.ce.mr.csv (details)
22087002
Korzelius J et al., 2011 15 Caenorhabditis elegans cyclin D/CDK4 and cyclin E/CDK2 induce distinct cell cycle re-entry programs in differentiated muscle cells.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00040426.ce.mr.csv (details)
22102824
Choi YJ et al., 2011 14 A deep sequencing approach to comparatively analyze the transcriptome of lifecycle stages of the filarial worm, Brugia malayi.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00042241.bma.rs.csv (details)
22180794
Zhang T et al., 2012 6 Caenorhabditis elegans RNA-processing protein TDP-1 regulates protein homeostasis and life span.
GEO Record: GSE34113 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00040603.ce.mr.csv (details)
22232551
Chen C et al., 2012 12 Heme utilization in the Caenorhabditis elegans hypodermal cells is facilitated by heme-responsive gene-2.
GEO Record: GSE34471 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00040730.ce.mr.csv (details)
22303006
Laing ST et al., 2012 20 The transcriptional response of Caenorhabditis elegans to Ivermectin exposure identifies novel genes involved in the response to reduced food intake.
GEO Record: GSE22660 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00040808.ce.mr.csv (details)
22348077
Bukhari SI et al., 2012 4 The microRNA pathway controls germ cell proliferation and differentiation in C. elegans.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00040823.ce.mr.csv (details)
22370633
Tsyusko O et al., 2012 6 Toxicogenomic responses of the model organism Caenorhabditis elegans to gold nanoparticles.
GEO Record: GSE32521 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00040821.ce.mr.csv (details)
22372763
Vasquez-Rifo A et al., 2012 16 Developmental characterization of the microRNA-specific C. elegans Argonautes alg-1 and alg-2.
GEO Record: GSE35505 Platform: GPL15181
Download gene-centric, log2 transformed data: WBPaper00040911.ce.mr.csv (details)
22448270
Jovanovic M et al., 2012 6 RIP-chip-SRM--a new combinatorial large-scale approach identifies a set of translationally regulated bantam/miR-58 targets in C. elegans.
GEO Record: GSE32941 GSE32943 GSE32944 Platform: GPL14724
Download gene-centric, log2 transformed data: WBPaper00040925.ce.mr.csv (details)
22454234
Vadla B et al., 2012 6 lin-28 controls the succession of cell fate choices via two distinct activities.
GEO Record: GSE35634 Platform: GPL15202
Download gene-centric, log2 transformed data: WBPaper00040932.ce.mr.csv (details)
22457637
Zarse K et al., 2012 6 Impaired insulin/IGF1 signaling extends life span by promoting mitochondrial L-proline catabolism to induce a transient ROS signal.
GEO Record: GSE36041 Platform: GPL13776
Download gene-centric, log2 transformed data: WBPaper00040959.ce.rs.csv (details)
22482728
Pietsch K et al., 2012 24 Meta-Analysis of Global Transcriptomics Suggests that Conserved Genetic Pathways are Responsible for Quercetin and Tannic Acid Mediated Longevity in C. elegans.
GEO Record: GSE35354 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00040963.ce.mr.csv (details)
22493606
Kudlow BA et al., 2012 15 Systematic analysis of tissue-restricted miRISCs reveals a broad role for microRNAs in suppressing basal activity of the C. elegans pathogen response.
GEO Record: GSE36419 Platform: GPL5883
Download gene-centric, log2 transformed data: WBPaper00040985.ce.mr.csv (details)
22503424
Pathare PP et al., 2012 9 Coordinate regulation of lipid metabolism by novel nuclear receptor partnerships.
GEO Record: GSE34856 Platform: GPL9458
Download gene-centric, log2 transformed data: WBPaper00040998.ce.mr.csv (details)
22511885
Twumasi-Boateng K et al., 2012 9 Dissociation of immune responses from pathogen colonization supports pattern recognition in C. elegans.
GEO Record: GSE39536 Platform: GPL9458
Download gene-centric, log2 transformed data: WBPaper00040990.ce.mr.csv (details)
22514739
Menzel R et al., 2012 27 The Nematode Caenorhabditis elegans, Stress and Aging: Identifying the Complex Interplay of Genetic Pathways Following the Treatment with Humic Substances.
GEO Record: GSE35360 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00041002.ce.mr.csv (details)
22529848
Maxwell C et al., 2012 10 Nutritional control of mRNA isoform expression during developmental arrest and recovery in C. elegans.
GEO Record: GSE33023 Platform: GPL14752
Download gene-centric, log2 transformed data: WBPaper00041010.ce.rs.csv (details)
22539650
Levin M et al., 2012 30 Developmental milestones punctuate gene expression in the Caenorhabditis embryo.
GEO Record: GSE31422 Platform: GPL14144
Download gene-centric, log2 transformed data: WBPaper00041190.cbg.mr.csv (details)
22560298
Levin M et al., 2012 30 Developmental milestones punctuate gene expression in the Caenorhabditis embryo.
GEO Record: GSE31422 Platform: GPL14144
Download gene-centric, log2 transformed data: WBPaper00041190.cbn.mr.csv (details)
22560298
Levin M et al., 2012 30 Developmental milestones punctuate gene expression in the Caenorhabditis embryo.
GEO Record: GSE31422 Platform: GPL14144
Download gene-centric, log2 transformed data: WBPaper00041190.cja.mr.csv (details)
22560298
Levin M et al., 2012 30 Developmental milestones punctuate gene expression in the Caenorhabditis embryo.
GEO Record: GSE31422 Platform: GPL14144
Download gene-centric, log2 transformed data: WBPaper00041190.cre.mr.csv (details)
22560298
Levin M et al., 2012 30 Developmental milestones punctuate gene expression in the Caenorhabditis embryo.
GEO Record: GSE31422 Platform: GPL14144
Download gene-centric, log2 transformed data: WBPaper00041190.ce.mr.csv (details)
22560298
Smith LM et al., 2012 4 Multiple insert size paired-end sequencing for deconvolution of complex transcriptomes.
GEO Record: GSE40507 Platform: GPL13776
Download gene-centric, log2 transformed data: WBPaper00041119.ce.rs.csv (details)
22614838
Grishkevich V et al., 2012 90 A genomic bias for genotype-environment interactions in C. elegans.
GEO Record: GSE34650 Platform: GPL13394
Download gene-centric, log2 transformed data: WBPaper00041174.ce.mr.csv (details)
22669615
Vinuela A et al., 2012 14 Aging Uncouples Heritability and Expression-QTL in Caenorhabditis elegans
GEO Record: GSE22887 Platform: GPL4038
Download gene-centric, log2 transformed data: WBPaper00040858.ce.mr.csv (details)
22670229
Sahu SN et al., 2012 15 Genomic analysis of immune response against Vibrio cholerae hemolysin in Caenorhabditis elegans.
GEO Record: GSE34026 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00041163.ce.mr.csv (details)
22675448
Bagijn MP et al., 2012 9 Function, targets, and evolution of Caenorhabditis elegans piRNAs.
GEO Record: GSE37432 GSE37433 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00041191.ce.mr.csv (details)
22700655