SPELL - Nematode - Dataset Listing
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SPELL Version 2.0.3

Publication Num.
Conditions
Brief Description PubMed ID
Sinha A et al., 2014 3 A functional genomic screen for evolutionarily conserved genes required for lifespan and immunity in germline-deficient C. elegans.
GEO Record: GSE44703 Platform: GPL10094
Download gene-centric, log2 transformed data: WBPaper00045571.ce.mr.csv (details)
25093668
Skjeldam HK et al., 2010 6 Loss of Caenorhabditis elegans UNG-1 uracil-DNA glycosylase affects apoptosis in response to DNA damaging agents.
GEO Record: GSE21467 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00036291.ce.mr.csv (details)
20493785
Smith CJ et al., 2010 6 Time-lapse imaging and cell-specific expression profiling reveal dynamic branching and molecular determinants of a multi-dendritic nociceptor in C. elegans.
GEO Record: GSE21162 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00036375.ce.mr.csv (details)
20537990
Smith LM et al., 2012 4 Multiple insert size paired-end sequencing for deconvolution of complex transcriptomes.
GEO Record: GSE40507 Platform: GPL13776
Download gene-centric, log2 transformed data: WBPaper00041119.ce.rs.csv (details)
22614838
Sonoda S et al., 2016 12 Sperm Affects Head Sensory Neuron in Temperature Tolerance of Caenorhabditis elegans.
GEO Record: GSE81409 Platform: GPL10094
Download gene-centric, log2 transformed data: WBPaper00049736.ce.mr.csv (details)
27320929
Sorokin EP et al., 2014 52 Competence for chemical reprogramming of sexual fate correlates with an intersexual molecular signature in Caenorhabditis elegans.
GEO Record: GSE54030 Platform: GPL13776
Download gene-centric, log2 transformed data: WBPaper00045618.ce.rs.csv (details)
25146970
Spencer WC et al., 2011 47 A spatial and temporal map of C. elegans gene expression.
GEO Record: GSE23245 GSE23246 GSE23247 GSE23248 GSE23249 GSE23250 GSE23251 GSE23252 GSE23253 GSE23254 GSE23255 GSE23256 GSE23257 GSE23258 GSE23259 GSE23260 GSE23261 GSE23262 GSE23263 GSE23264 GSE23265 GSE23266 GSE23267 GSE23268 GSE23269 GSE23270 GSE23271 GSE23272 GSE23273 GSE23274 GSE23275 GSE23276 GSE23277 GSE23278 GSE23279 GSE23280 GSE23281 GSE23282 GSE23283 GSE23284 GSE23285 GSE23286 GSE23287 GSE23770 GSE25350 GSE25351 Platform: GPL5634
Download gene-centric, log2 transformed data: WBPaper00037950.ce.tr.csv (details)
21177967
Spiegler V et al., 2017 15 Transcriptome analysis reveals molecular anthelmintic effects of procyanidins in C. elegans.
GEO Record: GSE101680 Platform: GPL19230
Download gene-centric, log2 transformed data: WBPaper00053092.ce.mr.csv (details)
28926584
Spike CA et al., 2008 4 DEPS-1 promotes P-granule assembly and RNA interference in C. elegans germ cells.
GEO Record: GSE9993 Platform: GPL3860
Download gene-centric, log2 transformed data: WBPaper00031477.ce.mr.csv (details)
18234720
Spike CA et al., 2014 12 Translational control of the oogenic program by components of OMA ribonucleoprotein particles in Caenorhabditis elegans.
GEO Record: GSE54513 GSE54517 GSE54518 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00045802.ce.mr.csv (details)
25261697
Stadler M et al., 2013 6 Conserved translatome remodeling in nematode species executing a shared developmental transition.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00045465.cbn.rs.csv (details)
24098135
Stadler M et al., 2013 6 Conserved translatome remodeling in nematode species executing a shared developmental transition.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00045465.cbg.rs.csv (details)
24098135
Stadler M et al., 2011 16 Wobble base-pairing slows in vivo translation elongation in metazoans.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00040379.ce.rs.csv (details)
22045228
Stadler M et al., 2012 17 Contributions of mRNA abundance, ribosome loading, and post- or peri-translational effects to temporal repression of C. elegans heterochronic miRNA targets.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00041361.ce.rs.csv (details)
22855835
Stadler M et al., 2013 6 Conserved translatome remodeling in nematode species executing a shared developmental transition.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00045465.ce.rs.csv (details)
24098135
Stadler M et al., 2013 6 Conserved translatome remodeling in nematode species executing a shared developmental transition.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00045465.cre.rs.csv (details)
24098135
Starnes D et al., 2019 15 Toxicogenomic responses of Caenorhabditis elegans to pristine and transformed zinc oxide nanoparticles.
GEO Record: GSE114881 Platform: GPL19230
Download gene-centric, log2 transformed data: WBPaper00056297.ce.mr.csv (details)
30823346
Starnes DL et al., 2016 12 Distinct transcriptomic responses of Caenorhabditis elegans to pristine and sulfidized silver nanoparticles.
GEO Record: GSE70509 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00049311.ce.mr.csv (details)
26925754
Sterken MG et al., 2021 40 Transcriptional analysis of the response of C. elegans to ethanol exposure.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00061443.ce.mr.csv (details)
34040055
Stoeckius M et al., 2014 15 Paternal RNA contributions in the Caenorhabditis elegans zygote.
GEO Record: GSE57351 Platform: GPL13776
Download gene-centric, log2 transformed data: WBPaper00045359.ce.rs.csv (details)
24894551
Stoeckius M et al., 2014 8 Global characterization of the oocyte-to-embryo transition in Caenorhabditis elegans uncovers a novel mRNA clearance mechanism.
GEO Record: GSE58141 Platform: GPL13776
Download gene-centric, log2 transformed data: WBPaper00045420.ce.rs.csv (details)
24957527
Studencka M et al., 2012 10 Novel roles of Caenorhabditis elegans heterochromatin protein HP1 and linker histone in the regulation of innate immune gene expression.
GEO Record: GSE25714 Platform: GPL7727
Download gene-centric, log2 transformed data: WBPaper00040410.ce.mr.csv (details)
22083954
Studencka M et al., 2012 8 Transcriptional repression of Hox genes by C. elegans HP1/HPL and H1/HIS-24.
GEO Record: GSE33339 Platform: GPL7727
Download gene-centric, log2 transformed data: WBPaper00041609.ce.mr.csv (details)
23028351
Sugi T et al., 2011 12 Regulation of behavioral plasticity by systemic temperature signaling in Caenorhabditis elegans.
GEO Record: GSE28856 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00039792.ce.mr.csv (details)
21706021
Sun J et al., 2011 6 Neuronal GPCR controls innate immunity by regulating noncanonical unfolded protein response genes.
GEO Record: GSE27867 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00038304.ce.mr.csv (details)
21474712
Swain S et al., 2010 72 Linking toxicant physiological mode of action with induced gene expression changes in Caenorhabditis elegans.
GEO Record: GSE21008 GSE21010 GSE21011 GSE21012 Platform: GPL10238
Download gene-centric, log2 transformed data: WBPaper00036123.ce.mr.csv (details)
20331876
Szewczyk NJ et al., 2006 3 Delayed development and lifespan extension as features of metabolic lifestyle alteration in C. elegans under dietary restriction.
GEO Record: GSE6057 Platform: GPL3411
Download gene-centric, log2 transformed data: WBPaper00028564.ce.mr.csv (details)
17023606
Tabuchi TM et al., 2011 12 Chromosome-biased binding and gene regulation by the Caenorhabditis elegans DRM complex.
GEO Record: GSE28853 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00038427.ce.mr.csv (details)
21589891
Tabuchi TM et al., 2014 12 Opposing activities of DRM and MES-4 tune gene expression and X-chromosome repression in Caenorhabditis elegans germ cells.
GEO Record: GSE52064 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00044545.ce.mr.csv (details)
24281426
Takayama J et al., 2010 6 Single-cell transcriptional analysis of taste sensory neuron pair in Caenorhabditis elegans.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00035424.ce.mr.csv (details)
19875417