SPELL - Nematode - Dataset Listing
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SPELL Version 2.0.3

Publication Num.
Conditions
Brief Description PubMed ID
Watson E et al., 2013 9 Integration of metabolic and gene regulatory networks modulates the C. elegans dietary response.
GEO Record: GSE43952 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00042204.ce.mr.csv (details)
23540702
Gharbi H et al., 2013 6 Loss of the Birt-Hogg-Dube gene product folliculin induces longevity in a hypoxia-inducible factor-dependent manner.
GEO Record: GSE43207 Platform: GPL11346
Download gene-centric, log2 transformed data: WBPaper00042236.ce.mr.csv (details)
23566034
Arczewska KD et al., 2013 10 Active transcriptomic and proteomic reprogramming in the C. elegans nucleotide excision repair mutant xpa-1.
GEO Record: GSE39252 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00042234.ce.mr.csv (details)
23580547
Riedel CG et al., 2013 8 DAF-16 employs the chromatin remodeller SWI/SNF to promote stress resistance and longevity.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00042296.ce.rs.csv (details)
23604319
Chen PH et al., 2013 2 Molecular characterization of toxicity mechanism of single-walled carbon nanotubes.
GEO Record: GSE41486 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00042331.ce.mr.csv (details)
23623425
Lewis JA et al., 2013 146 Alterations in gene expression in Caenorhabditis elegans associated with organophosphate pesticide intoxication and recovery.
GEO Record: GSE41366 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00042340.ce.mr.csv (details)
23631360
Tamayo JV et al., 2013 26 Functional transcriptomic analysis of the role of MAB-5/Hox in Q neuroblast migration in Caenorhabditis elegans.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00042361.ce.rs.csv (details)
23642123
Cui M et al., 2013 6 The tumor suppressor Rb critically regulates starvation-induced stress response in C. elegans.
GEO Record: GSE45651 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00048637.ce.mr.csv (details)
23664972
Martorell P et al., 2013 7 A cocoa peptide protects Caenorhabditis elegans from oxidative stress and -amyloid peptide toxicity.
GEO Record: GSE44318 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00042404.ce.mr.csv (details)
23675471
Sarkies P et al., 2013 20 Competition between virus-derived and endogenous small RNAs regulates gene expression in Caenorhabditis elegans.
GEO Record: GSE41056 GSE41058 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00042574.ce.mr.csv (details)
23811144
Than MT et al., 2013 4 Functional analysis of neuronal microRNAs in Caenorhabditis elegans dauer formation by combinational genetics and Neuronal miRISC immunoprecipitation.
GEO Record: GSE45871 Platform: GPL5883
Download gene-centric, log2 transformed data: WBPaper00042548.ce.mr.csv (details)
23818874
Sahu SN et al., 2013 9 Genomic analysis of stress response against arsenic in Caenorhabditis elegans.
GEO Record: GSE39012 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00043980.ce.mr.csv (details)
23894281
Tepper RG et al., 2013 1 PQM-1 complements DAF-16 as a key transcriptional regulator of DAF-2-mediated development and longevity.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00044005.ce.mr.csv (details)
23911329
Iatsenko I et al., 2013 3 New role for DCR-1/dicer in Caenorhabditis elegans innate immunity against the highly virulent bacterium Bacillus thuringiensis DB27.
GEO Record: GSE43905 Platform: GPL10094
Download gene-centric, log2 transformed data: WBPaper00044013.ce.mr.csv (details)
23918784
Magner DB et al., 2013 14 The NHR-8 nuclear receptor regulates cholesterol and bile acid homeostasis in C. elegans.
GEO Record: GSE48675 Platform: GPL7727
Download gene-centric, log2 transformed data: WBPaper00044030.ce.mr.csv (details)
23931753
Heestand BN et al., 2013 12 Dietary restriction induced longevity is mediated by nuclear receptor NHR-62 in Caenorhabditis elegans.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00044037.ce.rs.csv (details)
23935515
Lee SH et al., 2013 27 Burkholderia pseudomallei suppresses Caenorhabditis elegans immunity by specific degradation of a GATA transcription factor.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00044091.ce.mr.csv (details)
23980181
Depuydt G et al., 2013 15 Reduced insulin/insulin-like growth factor-1 signaling and dietary restriction inhibit translation but preserve muscle mass in Caenorhabditis elegans.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00044128.ce.ms.csv (details)
24002365
Lans H et al., 2013 8 DNA damage leads to progressive replicative decline but extends the life span of long-lived mutant animals.
GEO Record: GSE39145 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00044163.ce.mr.csv (details)
24013725
Pferdehirt RR et al., 2013 9 SUMOylation is essential for sex-specific assembly and function of the Caenorhabditis elegans dosage compensation complex on X chromosomes.
GEO Record: GSE48347 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00044197.ce.mr.csv (details)
24043781
Schmeisser K et al., 2013 9 Role of sirtuins in lifespan regulation is linked to methylation of nicotinamide.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00044260.ce.rs.csv (details)
24077178
Stadler M et al., 2013 6 Conserved translatome remodeling in nematode species executing a shared developmental transition.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00045465.cbn.rs.csv (details)
24098135
Stadler M et al., 2013 6 Conserved translatome remodeling in nematode species executing a shared developmental transition.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00045465.cbg.rs.csv (details)
24098135
Stadler M et al., 2013 6 Conserved translatome remodeling in nematode species executing a shared developmental transition.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00045465.ce.rs.csv (details)
24098135
Stadler M et al., 2013 6 Conserved translatome remodeling in nematode species executing a shared developmental transition.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00045465.cre.rs.csv (details)
24098135
McElwee MK et al., 2013 24 Comparative toxicogenomic responses of mercuric and methyl-mercury.
GEO Record: GSE28915 Platform: GPL7727
Download gene-centric, log2 transformed data: WBPaper00044316.ce.mr.csv (details)
24118919
Gout JF et al., 2013 9 Large-scale detection of in vivo transcription errors.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00044391.ce.rs.csv (details)
24167253
Engstrom PG et al., 2013 3 Systematic evaluation of spliced alignment programs for RNA-seq data.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00045464.ce.rs.csv (details)
24185836
Schmeisser S et al., 2013 22 Neuronal ROS signaling rather than AMPK/sirtuin-mediated energy sensing links dietary restriction to lifespan extension.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00044426.ce.rs.csv (details)
24199155
Tabuchi TM et al., 2014 12 Opposing activities of DRM and MES-4 tune gene expression and X-chromosome repression in Caenorhabditis elegans germ cells.
GEO Record: GSE52064 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00044545.ce.mr.csv (details)
24281426