SPELL - Nematode - Dataset Listing
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Dataset Listing

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SPELL Version 2.0.3

Publication Num.
Conditions
Brief Description PubMed ID
Dallaire A et al., 2014 12 Expression profile of Caenorhabditis elegans mutant for the Werner syndrome gene ortholog reveals the impact of vitamin C on development to increase life span.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00045934.ce.rs.csv (details)
25346348
Ding W et al., 2015 12 s-Adenosylmethionine Levels Govern Innate Immunity through Distinct Methylation-Dependent Pathways.
GEO Record: GSE70692 Platform: GPL19230
Download gene-centric, log2 transformed data: WBPaper00048490.ce.mr.csv (details)
26321661
Miller EV et al., 2015 12 The Conserved G-Protein Coupled Receptor FSHR-1 Regulates Protective Host Responses to Infection and Oxidative Stress.
GEO Record: GSE72029 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00048530.ce.mr.csv (details)
26360906
Friday AJ et al., 2015 12 Spatial and temporal translational control of germ cell mRNAs via an eIF4E isoform, IFE-1.
GEO Record: GSE74459 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00048771.ce.mr.csv (details)
26542024
Starnes DL et al., 2016 12 Distinct transcriptomic responses of Caenorhabditis elegans to pristine and sulfidized silver nanoparticles.
GEO Record: GSE70509 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00049311.ce.mr.csv (details)
26925754
Kim HE et al., 2016 12 Lipid Biosynthesis Coordinates a Mitochondrial-to-Cytosolic Stress Response.
GEO Record: GSE83722 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00050407.ce.mr.csv (details)
27610574
McJunkin K et al., 2017 12 A microRNA family exerts maternal control on sex determination in C. elegans.
GEO Record: GSE94701 GSE94702 GSE94704 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00050903.ce.mr.csv (details)
28279983
Gonzalez-Moragas L et al., 2017 12 Toxicogenomics of iron oxide nanoparticles in the nematode C. elegans.
GEO Record: GSE93186 GSE93187 GSE93188 Platform: GPL19230
Download gene-centric, log2 transformed data: WBPaper00051437.ce.mr.csv (details)
28673184
Hibshman JD et al., 2017 12 daf-16/FoxO promotes gluconeogenesis and trehalose synthesis during starvation to support survival.
GEO Record: GSE99201 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00053236.ce.mr.csv (details)
29063832
Honjoh S et al., 2017 12 The Sexual Dimorphism of Dietary Restriction Responsiveness in Caenorhabditis elegans.
GEO Record: GSE37303 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00053481.ce.mr.csv (details)
29281814
Kim H et al., 2017 12 JAK/STAT and TGF-B activation as potential adverse outcome pathway of TiO2NPs phototoxicity in Caenorhabditis elegans.
GEO Record: GSE84441 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00053505.ce.mr.csv (details)
29259193
Navarro-Herrera D et al., 2018 12 Dihomo-gamma-linolenic acid induces fat loss in C. elegans in an omega-3-independent manner by promoting peroxisomal fatty acid -oxidation.
GEO Record: GSE102802 Platform: GPL19230
Download gene-centric, log2 transformed data: WBPaper00053736.ce.mr.csv (details)
29465730
Hartman JH et al., 2019 12 MANF deletion abrogates early larval Caenorhabditis elegans stress response to tunicamycin and Pseudomonas aeruginosa.
GEO Record: GSE118294 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00056823.ce.mr.csv (details)
31138438
Esse R et al., 2019 12 DOT1L complex suppresses transcription from enhancer elements and ectopic RNAi in Caenorhabditis elegans.
GEO Record: GSE115677 Platform: GPL19230
Download gene-centric, log2 transformed data: WBPaper00057029.ce.mr.csv (details)
31300558
Herholz M et al., 2019 12 KLF-1 orchestrates a xenobiotic detoxification program essential for longevity of mitochondrial mutants.
GEO Record: GSE61771 Platform: GPL19230
Download gene-centric, log2 transformed data: WBPaper00059194.ce.mr.csv (details)
31346165
Maglioni S et al., 2022 12 Neuroligin-mediated neurodevelopmental defects are induced by mitochondrial dysfunction and prevented by lutein in C. elegans.
GEO Record: GSE144573 GSE144574 Platform: GPL19230
Download gene-centric, log2 transformed data: WBPaper00064182.ce.mr.csv (details)
35551180
Robert VJ et al., 2014 12 The SET-2/SET1 histone H3K4 methyltransferase maintains pluripotency in the Caenorhabditis elegans germline.
GEO Record: GSE61094 Platform: GPL10094
Download gene-centric, log2 transformed data: WBPaper00045861.ce.mr.csv (details)
25310986
Sonoda S et al., 2016 12 Sperm Affects Head Sensory Neuron in Temperature Tolerance of Caenorhabditis elegans.
GEO Record: GSE81409 Platform: GPL10094
Download gene-centric, log2 transformed data: WBPaper00049736.ce.mr.csv (details)
27320929
Reinke V et al., 2000 13 A global profile of germline gene expression in C. elegans.
GEO Record: GSE5 Platform: GPL14
Download gene-centric, log2 transformed data: WBPaper00004349.ce.mr.csv (details)
11030340
Grun D et al., 2014 13 Conservation of mRNA and protein expression during development of C. elegans.
GEO Record: GSE53359 Platform: GPL13776
Download gene-centric, log2 transformed data: WBPaper00044760.ce.rs.csv (details)
24462290
Yuen GJ et al., 2018 13 Both live and dead Enterococci activate Caenorhabditis elegans host defense via immune and stress pathways.
GEO Record: GSE95636 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00053688.ce.mr.csv (details)
29436902
Yanai I et al., 2009 13 Comparison of diverse developmental transcriptomes reveals that coexpression of gene neighbors is not evolutionarily conserved.
GEO Record: GSE15234 GSE15551 Platform: GPL8304 GPL8303
Download gene-centric, log2 transformed data: WBPaper00035187.cbg.mr.csv (details)
19745112
Lee SJ et al., 2009 14 Glucose shortens the life span of C. elegans by downregulating DAF-16/FOXO activity and aquaporin gene expression.
GEO Record: GSE18561 GSE18562 GSE18563 Platform: GPL9450
Download gene-centric, log2 transformed data: WBPaper00035479.ce.mr.csv (details)
19883616
Dawe AS et al., 2009 14 Low-intensity microwave irradiation does not substantially alter gene expression in late larval and adult Caenorhabditis elegans.
GEO Record: GSE10787 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00034636.ce.mr.csv (details)
19533680
McCarroll SA et al., 2004 14 Comparing genomic expression patterns across species identifies shared transcriptional profile in aging.
GEO Record: GSE832 GSE946 Platform: GPL576 GPL924
Download gene-centric, log2 transformed data: WBPaper00006365.ce.mr.csv (details)
14730301
Vinuela A et al., 2012 14 Aging Uncouples Heritability and Expression-QTL in Caenorhabditis elegans
GEO Record: GSE22887 Platform: GPL4038
Download gene-centric, log2 transformed data: WBPaper00040858.ce.mr.csv (details)
22670229
Block DH et al., 2015 14 The Developmental Intestinal Regulator ELT-2 Controls p38-Dependent Immune Responses in Adult C. elegans.
GEO Record: GSE63846 Platform: GPL9458
Download gene-centric, log2 transformed data: WBPaper00046858.ce.mr.csv (details)
26016853
Geillinger KE et al., 2014 14 Intestinal amino acid availability via PEPT-1 affects TORC1/2 signaling and the unfolded protein response.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00045460.ce.ms.csv (details)
24999909
De Stasio EA et al., 2018 14 An Expanded Role for the RFX Transcription Factor DAF-19, with Dual Functions in Ciliated and Non-ciliated Neurons.
GEO Record: GSE96068 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00053550.ce.mr.csv (details)
29301909
Magner DB et al., 2013 14 The NHR-8 nuclear receptor regulates cholesterol and bile acid homeostasis in C. elegans.
GEO Record: GSE48675 Platform: GPL7727
Download gene-centric, log2 transformed data: WBPaper00044030.ce.mr.csv (details)
23931753