SPELL - Nematode - Dataset Listing
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Dataset Listing

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SPELL Version 2.0.3

Publication Num.
Conditions
Brief Description PubMed ID
Cui M et al., 2013 6 The tumor suppressor Rb critically regulates starvation-induced stress response in C. elegans.
GEO Record: GSE45651 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00048637.ce.mr.csv (details)
23664972
Osborne Nishimura E et al., 2015 6 Asymmetric transcript discovery by RNA-seq in C. elegans blastomeres identifies neg-1, a gene important for anterior morphogenesis.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00046691.ce.rs.csv (details)
25875092
Lin YF et al., 2016 6 Maintenance and propagation of a deleterious mitochondrial genome by the mitochondrial unfolded protein response.
GEO Record: GSE73669 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00049538.ce.mr.csv (details)
27135930
Hillier LW et al., 2009 6 Massively parallel sequencing of the polyadenylated transcriptome of C. elegans.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00032529.cja.rs.csv (details)
19181841
Kirienko DR et al., 2016 6 A High-Content, Phenotypic Screen Identifies Fluorouridine as an Inhibitor of Pyoverdine Biosynthesis and Pseudomonas aeruginosa Virulence.
GEO Record: GSE85342 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00050079.ce.mr.csv (details)
27579370
Thomas CG et al., 2012 6 Simplification and desexualization of gene expression in self-fertile nematodes.
GEO Record: GSE41367 Platform: GPL13776 GPL13657 GPL13776 GPL16135 GPL16136 GPL16137 GPL16138 GPL16139 GPL16140 GPL16141
Download gene-centric, log2 transformed data: WBPaper00041689.cja.rs.csv (details)
23103191
Thomas CG et al., 2012 6 Simplification and desexualization of gene expression in self-fertile nematodes.
GEO Record: GSE41367 Platform: GPL13776 GPL13657 GPL13776 GPL16135 GPL16136 GPL16137 GPL16138 GPL16139 GPL16140 GPL16141
Download gene-centric, log2 transformed data: WBPaper00041689.cre.rs.csv (details)
23103191
Stadler M et al., 2013 6 Conserved translatome remodeling in nematode species executing a shared developmental transition.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00045465.cre.rs.csv (details)
24098135
Cui M et al., 2016 6 Starvation-Induced Stress Response Is Critically Impacted by Ceramide Levels in Caenorhabditis elegans.
GEO Record: GSE84894 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00050520.ce.mr.csv (details)
27974500
Hoshikawa H et al., 2017 6 Octopamine enhances oxidative stress resistance through the fasting-responsive transcription factor DAF-16/FOXO inC.elegans.
GEO Record: GSE89731 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00050767.ce.mr.csv (details)
28105749
Albritton SE et al., 2014 6 Sex-biased gene expression and evolution of the x chromosome in nematodes.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00045232.ppa.rs.csv (details)
24793291
Gerstein MB et al., 2010 6 Integrative analysis of the Caenorhabditis elegans genome by the modENCODE project.
GEO Record: GSE25785 GSE25786 GSE25788 GSE25789 GSE25790 GSE25791 GSE25792 GSE25793 GSE25794 GSE25795 GSE25798 GSE25800 GSE25801 GSE25802 GSE25803 GSE25804 GSE25805 GSE25808 GSE25809 GSE25810 GSE25811 Platform: GPL9309
Download gene-centric, log2 transformed data: WBPaper00037953.ce.tr.csv (details)
21177976
Eckl J et al., 2017 6 Hsp90-downregulation influences the heat-shock response, innate immune response and onset of oocyte development in nematodes.
GEO Record: GSE105030 Platform: GPL19230
Download gene-centric, log2 transformed data: WBPaper00053254.ce.mr.csv (details)
29078207
Geisler F et al., 2019 6 The intestinal intermediate filament network responds to and protects against microbial insults and toxins.
GEO Record: GSE125131 GSE125132 GSE125133 Platform: GPL19230
Download gene-centric, log2 transformed data: WBPaper00056167_1.ce.mr.csv (details)
30630824
Geisler F et al., 2019 6 The intestinal intermediate filament network responds to and protects against microbial insults and toxins.
GEO Record: GSE125131 GSE125132 GSE125133 Platform: GPL19230
Download gene-centric, log2 transformed data: WBPaper00056167_2.ce.mr.csv (details)
30630824
Revtovich AV et al., 2019 6 Interplay between mitochondria and diet mediates pathogen and stress resistance in Caenorhabditis elegans.
GEO Record: GSE97678 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00056391.ce.mr.csv (details)
30865620
Lee H et al., 2019 6 The Hippo Pathway Is Essential for Maintenance of Apicobasal Polarity in the Growing Intestine of Caenorhabditis elegans.
GEO Record: GSE133667 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00057136.ce.mr.csv (details)
31358532
Alsaleh SA et al., 2021 6 Perchlorate detection via an invertebrate biosensor.
GEO Record: GSE149596 Platform: GPL19230
Download gene-centric, log2 transformed data: WBPaper00060828.ce.mr.csv (details)
33392613
Correa RL et al., 2010 6 MicroRNA-directed siRNA biogenesis in Caenorhabditis elegans.
GEO Record: GSE20558 Platform: GPL8209
Download gene-centric, log2 transformed data: WBPaper00036130.ce.mr.csv (details)
20386745
Thyagarajan B et al., 2010 6 ETS-4 is a transcriptional regulator of life span in Caenorhabditis elegans.
GEO Record: GSE21851 Platform: GPL7272
Download gene-centric, log2 transformed data: WBPaper00037624.ce.mr.csv (details)
20862312
Honda Y et al., 2011 6 Lifespan-extending effects of royal jelly and its related substances on the nematode Caenorhabditis elegans.
GEO Record: GSE26094 Platform: GPL11346
Download gene-centric, log2 transformed data: WBPaper00040116.ce.mr.csv (details)
21858156
Gharbi H et al., 2013 6 Loss of the Birt-Hogg-Dube gene product folliculin induces longevity in a hypoxia-inducible factor-dependent manner.
GEO Record: GSE43207 Platform: GPL11346
Download gene-centric, log2 transformed data: WBPaper00042236.ce.mr.csv (details)
23566034
Jiang M et al., 2001 7 Genome-wide analysis of developmental and sex-regulated gene expression profiles in Caenorhabditis elegans.
GEO Record: GSE3633 Platform: GPL3096 GPL3097 GPL3098
Download gene-centric, log2 transformed data: WBPaper00004489.ce.mr.csv (details)
11134517
Fang EF et al., 2017 7 Tomatidine enhances lifespan and healthspan in C. elegans through mitophagy induction via the SKN-1/Nrf2 pathway.
GEO Record: GSE85237 Platform: GPL10094
Download gene-centric, log2 transformed data: WBPaper00051079.ce.mr.csv (details)
28397803
Fox RM et al., 2005 7 A gene expression fingerprint of C. elegans embryonic motor neurons.
GEO Record: GSE8159 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00025141.ce.mr.csv (details)
15780142
Ercan S et al., 2011 7 High nucleosome occupancy is encoded at X-linked gene promoters in C. elegans.
GEO Record: GSE20136 Platform: GPL8673
Download gene-centric, log2 transformed data: WBPaper00037949.ce.mr.csv (details)
21177966
Kwon JY et al., 2004 7 Ethanol-response genes and their regulation analyzed by a microarray and comparative genomic approach in the nematode Caenorhabditis elegans.
GEO Record: GSE3727 Platform: GPL2646 GPL2653 GPL3097
Download gene-centric, log2 transformed data: WBPaper00006465.ce.mr.csv (details)
15028283
Aarnio V et al., 2010 7 Fatty acid composition and gene expression profiles are altered in aryl hydrocarbon receptor-1 mutant Caenorhabditis elegans.
GEO Record: GSE16036 Platform: GPL5883
Download gene-centric, log2 transformed data: WBPaper00035560.ce.mr.csv (details)
20045492
Martorell P et al., 2013 7 A cocoa peptide protects Caenorhabditis elegans from oxidative stress and -amyloid peptide toxicity.
GEO Record: GSE44318 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00042404.ce.mr.csv (details)
23675471
He S et al., 2015 7 Transcriptional Control of Synaptic Remodeling through Regulated Expression of an Immunoglobulin Superfamily Protein.
GEO Record: GSE71618 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00048563.ce.mr.csv (details)
26387713