SPELL - Nematode - Dataset Listing
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SPELL Version 2.0.3

Publication Num.
Conditions
Brief Description PubMed ID
Bukhari SI et al., 2012 4 The microRNA pathway controls germ cell proliferation and differentiation in C. elegans.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00040823.ce.mr.csv (details)
22370633
Than MT et al., 2013 4 Functional analysis of neuronal microRNAs in Caenorhabditis elegans dauer formation by combinational genetics and Neuronal miRISC immunoprecipitation.
GEO Record: GSE45871 Platform: GPL5883
Download gene-centric, log2 transformed data: WBPaper00042548.ce.mr.csv (details)
23818874
Chamoli M et al., 2014 4 A novel kinase regulates dietary restriction-mediated longevity in Caenorhabditis elegans.
GEO Record: GSE40252 Platform: GPL11346
Download gene-centric, log2 transformed data: WBPaper00045036.ce.mr.csv (details)
24655420
GuhaThakurta D et al., 2002 5 Identification of a novel cis-regulatory element involved in the heat shock response in Caenorhabditis elegans using microarray gene expression and computational methods.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00005280.ce.mr.csv (details)
12097338
Welker NC et al., 2007 5 Genes misregulated in C. elegans deficient in Dicer, RDE-4, or RDE-1 are enriched for innate immunity genes.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00029437.ce.mr.csv (details)
17526642
Taubert S et al., 2008 5 The Mediator subunit MDT-15 confers metabolic adaptation to ingested material.
GEO Record: GSE9720 Platform: GPL5859
Download gene-centric, log2 transformed data: WBPaper00031850.ce.mr.csv (details)
18454197
Hristova M et al., 2005 5 The Caenorhabditis elegans heterochronic regulator LIN-14 is a novel transcription factor that controls the developmental timing of transcription from the insulin/insulin-like growth factor gene ins-33 by direct DNA binding.
GEO Record: GSE8520 Platform: GPL2646 GPL14
Download gene-centric, log2 transformed data: WBPaper00026952.ce.mr.csv (details)
16314527
Ortega-Cuellar D et al., 2010 5 Biotin starvation with adequate glucose provision causes paradoxical changes in fuel metabolism gene expression similar in rat (Rattus norvegicus), nematode (Caenorhabditis elegans) and yeast (Saccharomyces cerevisiae).
GEO Record: GSE18157 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00037086.ce.mr.csv (details)
20798549
Larance M et al., 2015 5 Global Proteomics Analysis of the Response to Starvation in C. elegans.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00046795.ce.ms.csv (details)
25963834
Hillier LW et al., 2008 5 Whole-genome sequencing and variant discovery in C. elegans.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00031443.ce.rs.csv (details)
18204455
Honda Y et al., 2012 5 Genes down-regulated in spaceflight are involved in the control of longevity in Caenorhabditis elegans.
GEO Record: GSE36358 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00041267.ce.mr.csv (details)
22768380
Eom HJ et al., 2014 5 Integrative assessment of benzene exposure to Caenorhabditis elegans using computational behavior and toxicogenomic analyses.
GEO Record: GSE24923 GSE23013 GSE24845 GSE24846 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00045374.ce.mr.csv (details)
24846693
Boehler CJ et al., 2014 5 Toxic-selenium and low-selenium transcriptomes in Caenorhabditis elegans: toxic selenium up-regulates oxidoreductase and down-regulates cuticle-associated genes.
GEO Record: GSE54011 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00045437.ce.mr.csv (details)
24971995
Martin N et al., 2017 6 Natural Genetic Variation in the Caenorhabditis elegans Response to Pseudomonas aeruginosa.
GEO Record: GSE86431 Platform: GPL10094
Download gene-centric, log2 transformed data: WBPaper00050712.ce.mr.csv (details)
28179390
Higashibata A et al., 2016 6 Microgravity elicits reproducible alterations in cytoskeletal and metabolic gene and protein expression in space-flown Caenorhabditis elegans.
GEO Record: GSE71771 Platform: GPL11346
Download gene-centric, log2 transformed data: WBPaper00051538.ce.mr.csv (details)
28725720
Lund J et al., 2002 6 Transcriptional profile of aging in C. elegans.
GEO Record: GSE4005 Platform: GPL2653 GPL2655 GPL3096 GPL3097 GPL3098
Download gene-centric, log2 transformed data: WBPaper00005475.ce.mr.csv (details)
12372248
Alvarez-Saavedra E et al., 2010 6 Many families of C. elegans microRNAs are not essential for development or viability.
GEO Record: GSE19557 Platform: GPL9815
Download gene-centric, log2 transformed data: WBPaper00035664.ce.mr.csv (details)
20096582
O'Rourke D et al., 2006 6 Genomic clusters, putative pathogen recognition molecules, and antimicrobial genes are induced by infection of C. elegans with M. nematophilum.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00027722.ce.mr.csv (details)
16809667
Etheridge T et al., 2011 6 The effectiveness of RNAi in Caenorhabditis elegans is maintained during spaceflight.
GEO Record: GSE27288 Platform: GPL13164
Download gene-centric, log2 transformed data: WBPaper00038519_2.ce.mr.csv (details)
21673804
Vadla B et al., 2012 6 lin-28 controls the succession of cell fate choices via two distinct activities.
GEO Record: GSE35634 Platform: GPL15202
Download gene-centric, log2 transformed data: WBPaper00040932.ce.mr.csv (details)
22457637
Saul N et al., 2014 6 Neurotoxic action of microcystin-LR is reflected in the transcriptional stress response of Caenorhabditis elegans.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00045807_2.ce.mr.csv (details)
25257166
Reinke, Valerie et al., 2010 6 Few gene expression differences between C. elegans grown in liquid versus on plates
GEO Record: GSE21526 Platform: GPL8673
Download gene-centric, log2 transformed data: WBPaper00038011.ce.mr.csv (details)
0
Custodia N et al., 2001 6 Caenorhabditis elegans as an environmental monitor using DNA microarray analysis.
GEO Record: GSE2970 Platform: GPL2652 GPL2653
Download gene-centric, log2 transformed data: WBPaper00005124.ce.mr.csv (details)
11795393
Liby P et al., 2006 6 BIR-1, the homologue of human Survivin, regulates expression of developmentally active collagen genes in C. elegans.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00028809.ce.mr.csv (details)
17116281
Roy PJ et al., 2002 6 Chromosomal clustering of muscle-expressed genes in Caenorhabditis elegans.
GEO Record: GSE2971 Platform: GPL2653
Download gene-centric, log2 transformed data: WBPaper00005428.ce.mr.csv (details)
12214599
Von Stetina SE et al., 2007 6 UNC-4 represses CEH-12/HB9 to specify synaptic inputs to VA motor neurons in C. elegans.
GEO Record: GSE32467 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00029115.ce.mr.csv (details)
17289921
Derry WB et al., 2007 6 Regulation of developmental rate and germ cell proliferation in Caenorhabditis elegans by the p53 gene network.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00028948.ce.mr.csv (details)
17186023
Kirienko NV et al., 2008 6 Coordinated regulation of intestinal functions in C. elegans by LIN-35/Rb and SLR-2.
GEO Record: GSE9246 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00031832.ce.mr.csv (details)
18437219
Grove CA et al., 2009 6 A multiparameter network reveals extensive divergence between C. elegans bHLH transcription factors.
GEO Record: GSE15762 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00034761.ce.mr.csv (details)
19632181
Zisoulis DG et al., 2010 6 Comprehensive discovery of endogenous Argonaute binding sites in Caenorhabditis elegans.
GEO Record: GSE19138 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00035588.ce.mr.csv (details)
20062054