SPELL - Nematode - Dataset Listing
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SPELL Version 2.0.3

Publication Num.
Conditions
Brief Description PubMed ID
Yee C et al., 2014 22 The intrinsic apoptosis pathway mediates the pro-longevity response to mitochondrial ROS in C. elegans.
GEO Record: GSE54024 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00045263.ce.mr.csv (details)
24813612
Eom HJ et al., 2014 5 Integrative assessment of benzene exposure to Caenorhabditis elegans using computational behavior and toxicogenomic analyses.
GEO Record: GSE24923 GSE23013 GSE24845 GSE24846 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00045374.ce.mr.csv (details)
24846693
Wang JJ et al., 2014 4 The influences of PRG-1 on the expression of small RNAs and mRNAs.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00045316.ce.rs.csv (details)
24884413
Stoeckius M et al., 2014 15 Paternal RNA contributions in the Caenorhabditis elegans zygote.
GEO Record: GSE57351 Platform: GPL13776
Download gene-centric, log2 transformed data: WBPaper00045359.ce.rs.csv (details)
24894551
Norris AD et al., 2014 1 A pair of RNA-binding proteins controls networks of splicing events contributing to specialization of neural cell types.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00045350.ce.rs.csv (details)
24910101
Stoeckius M et al., 2014 8 Global characterization of the oocyte-to-embryo transition in Caenorhabditis elegans uncovers a novel mRNA clearance mechanism.
GEO Record: GSE58141 Platform: GPL13776
Download gene-centric, log2 transformed data: WBPaper00045420.ce.rs.csv (details)
24957527
Tourette C et al., 2014 6 The Wnt receptor Ryk reduces neuronal and cell survival capacity by repressing FOXO activity during the early phases of mutant huntingtin pathogenicity.
GEO Record: GSE35939 Platform: GPL2875
Download gene-centric, log2 transformed data: WBPaper00045417.ce.mr.csv (details)
24960609
Boehler CJ et al., 2014 5 Toxic-selenium and low-selenium transcriptomes in Caenorhabditis elegans: toxic selenium up-regulates oxidoreductase and down-regulates cuticle-associated genes.
GEO Record: GSE54011 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00045437.ce.mr.csv (details)
24971995
Geillinger KE et al., 2014 14 Intestinal amino acid availability via PEPT-1 affects TORC1/2 signaling and the unfolded protein response.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00045460.ce.ms.csv (details)
24999909
Ortiz MA et al., 2014 16 A new dataset of spermatogenic vs. oogenic transcriptomes in the nematode Caenorhabditis elegans.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00045521.ce.rs.csv (details)
25060624
Sinha A et al., 2014 3 A functional genomic screen for evolutionarily conserved genes required for lifespan and immunity in germline-deficient C. elegans.
GEO Record: GSE44703 Platform: GPL10094
Download gene-centric, log2 transformed data: WBPaper00045571.ce.mr.csv (details)
25093668
Sorokin EP et al., 2014 52 Competence for chemical reprogramming of sexual fate correlates with an intersexual molecular signature in Caenorhabditis elegans.
GEO Record: GSE54030 Platform: GPL13776
Download gene-centric, log2 transformed data: WBPaper00045618.ce.rs.csv (details)
25146970
Mikl M et al., 2014 8 Alternative 3' UTR selection controls PAR-5 homeostasis and cell polarity in C. elegans embryos.
GEO Record: GSE59705 Platform: GPL13776
Download gene-centric, log2 transformed data: WBPaper00045705.ce.rs.csv (details)
25199833
Nousch M et al., 2014 9 The cytoplasmic poly(A) polymerases GLD-2 and GLD-4 promote general gene expression via distinct mechanisms.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00045729.ce.rs.csv (details)
25217583
Saul N et al., 2014 6 Neurotoxic action of microcystin-LR is reflected in the transcriptional stress response of Caenorhabditis elegans.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00045807_2.ce.mr.csv (details)
25257166
Saul N et al., 2014 6 Neurotoxic action of microcystin-LR is reflected in the transcriptional stress response of Caenorhabditis elegans.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00045807.ce.mr.csv (details)
25257166
Spike CA et al., 2014 12 Translational control of the oogenic program by components of OMA ribonucleoprotein particles in Caenorhabditis elegans.
GEO Record: GSE54513 GSE54517 GSE54518 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00045802.ce.mr.csv (details)
25261697
Robert VJ et al., 2014 12 The SET-2/SET1 histone H3K4 methyltransferase maintains pluripotency in the Caenorhabditis elegans germline.
GEO Record: GSE61094 Platform: GPL10094
Download gene-centric, log2 transformed data: WBPaper00045861.ce.mr.csv (details)
25310986
Head B et al., 2014 14 Recovery from an acute infection in C. elegans requires the GATA transcription factor ELT-2.
GEO Record: GSE54212 Platform: GPL11346
Download gene-centric, log2 transformed data: WBPaper00045918.ce.mr.csv (details)
25340560
Dallaire A et al., 2014 12 Expression profile of Caenorhabditis elegans mutant for the Werner syndrome gene ortholog reveals the impact of vitamin C on development to increase life span.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00045934.ce.rs.csv (details)
25346348
George-Raizen JB et al., 2014 21 Dynamically-expressed prion-like proteins form a cuticle in the pharynx of Caenorhabditis elegans.
GEO Record: GSE46291 GSE46288 GSE46289 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00045960.ce.mr.csv (details)
25361578
Kosmaczewski SG et al., 2014 4 The RtcB RNA ligase is an essential component of the metazoan unfolded protein response.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00045971.ce.rs.csv (details)
25366321
Arnold A et al., 2014 4 Functional characterization of C. elegans Y-box-binding proteins reveals tissue-specific functions and a critical role in the formation of polysomes.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00045985.ce.rs.csv (details)
25378320
Mueller MM et al., 2014 15 DAF-16/FOXO and EGL-27/GATA promote developmental growth in response to persistent somatic DNA damage.
GEO Record: GSE47778 GSE51161 GSE51162 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00047070_1.ce.mr.csv (details)
25419847
Mueller MM et al., 2014 36 DAF-16/FOXO and EGL-27/GATA promote developmental growth in response to persistent somatic DNA damage.
GEO Record: GSE47778 GSE51161 GSE51162 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00047070_2.ce.mr.csv (details)
25419847
Hassan WM et al., 2015 47 Identifying A-specific pathogenic mechanisms using a nematode model of Alzheimer's disease.
GEO Record: GSE65851 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00046102.ce.mr.csv (details)
25457027
Garrigues JM et al., 2015 4 Defining heterochromatin in C. elegans through genome-wide analysis of the heterochromatin protein 1 homolog HPL-2.
GEO Record: GSE58760 GSE58764 Platform: GPL18855
Download gene-centric, log2 transformed data: WBPaper00046104.ce.mr.csv (details)
25467431
Bond MR et al., 2014 36 Conserved nutrient sensor O-GlcNAc transferase is integral to C. elegans pathogen-specific immunity.
GEO Record: GSE53732 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00046083.ce.mr.csv (details)
25474640
Hashimshony T et al., 2015 154 Spatiotemporal transcriptomics reveals the evolutionary history of the endoderm germ layer.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00046121.ce.rs.csv (details)
25487147
Morgan PG et al., 2015 4 Comparison of proteomic and metabolomic profiles of mutants of the mitochondrial respiratory chain in Caenorhabditis elegans.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00046217.ce.ms.csv (details)
25530493