SPELL - Nematode - Dataset Listing
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Dataset Listing

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SPELL Version 2.0.3

Publication Num.
Conditions
Brief Description PubMed ID
Zisoulis DG et al., 2010 6 Comprehensive discovery of endogenous Argonaute binding sites in Caenorhabditis elegans.
GEO Record: GSE19138 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00035588.ce.mr.csv (details)
20062054
Asikainen S et al., 2010 12 Global microRNA expression profiling of Caenorhabditis elegans Parkinson's disease models.
GEO Record: GSE14899 Platform: GPL8200
Download gene-centric, log2 transformed data: WBPaper00035654.ce.mr.csv (details)
20091141
Alvarez-Saavedra E et al., 2010 6 Many families of C. elegans microRNAs are not essential for development or viability.
GEO Record: GSE19557 Platform: GPL9815
Download gene-centric, log2 transformed data: WBPaper00035664.ce.mr.csv (details)
20096582
Rohlfing AK et al., 2010 30 Genetic and physiological activation of osmosensitive gene expression mimics transcriptional signatures of pathogen infection in C. elegans.
GEO Record: GSE19310 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00035873.ce.mr.csv (details)
20126308
Estes KA et al., 2010 12 bZIP transcription factor zip-2 mediates an early response to Pseudomonas aeruginosa infection in Caenorhabditis elegans.
GEO Record: GSE50513 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00035891.ce.mr.csv (details)
20133860
Bolz DD et al., 2010 6 A conserved PMK-1/p38 MAPK is required in caenorhabditis elegans tissue-specific immune response to Yersinia pestis infection.
GEO Record: GSE20053 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00035892.ce.mr.csv (details)
20133945
Kershner AM et al., 2010 8 Genome-wide analysis of mRNA targets for Caenorhabditis elegans FBF, a conserved stem cell regulator.
GEO Record: GSE19922 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00035905.ce.mr.csv (details)
20142496
Clark AM et al., 2010 12 The microRNA miR-124 controls gene expression in the sensory nervous system of Caenorhabditis elegans.
GEO Record: GSE16050 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00035973.ce.mr.csv (details)
20176573
Borchert N et al., 2010 2 Proteogenomics of Pristionchus pacificus reveals distinct proteome structure of nematode models.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00036038.ppa.rs.csv (details)
20237107
Swain S et al., 2010 72 Linking toxicant physiological mode of action with induced gene expression changes in Caenorhabditis elegans.
GEO Record: GSE21008 GSE21010 GSE21011 GSE21012 Platform: GPL10238
Download gene-centric, log2 transformed data: WBPaper00036123.ce.mr.csv (details)
20331876
Love DC et al., 2010 18 Dynamic O-GlcNAc cycling at promoters of Caenorhabditis elegans genes regulating longevity, stress, and immunity.
GEO Record: GSE18132 GSE18131 GSE18130 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00036090.ce.mr.csv (details)
20368426
Fensgard O et al., 2010 9 A two-tiered compensatory response to loss of DNA repair modulates aging and stress response pathways.
GEO Record: GSE16405 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00036135.ce.mr.csv (details)
20382984
Correa RL et al., 2010 6 MicroRNA-directed siRNA biogenesis in Caenorhabditis elegans.
GEO Record: GSE20558 Platform: GPL8209
Download gene-centric, log2 transformed data: WBPaper00036130.ce.mr.csv (details)
20386745
Henis-Korenblit S et al., 2010 8 Insulin/IGF-1 signaling mutants reprogram ER stress response regulators to promote longevity.
GEO Record: GSE20148 Platform: GPL8209
Download gene-centric, log2 transformed data: WBPaper00036256.ce.mr.csv (details)
20460307
Vinuela A et al., 2010 54 Genome-wide gene expression regulation as a function of genotype and age in C. elegans.
GEO Record: GSE17071 Platform: GPL4038
Download gene-centric, log2 transformed data: WBPaper00036286.ce.mr.csv (details)
20488933
Skjeldam HK et al., 2010 6 Loss of Caenorhabditis elegans UNG-1 uracil-DNA glycosylase affects apoptosis in response to DNA damaging agents.
GEO Record: GSE21467 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00036291.ce.mr.csv (details)
20493785
Smith CJ et al., 2010 6 Time-lapse imaging and cell-specific expression profiling reveal dynamic branching and molecular determinants of a multi-dendritic nociceptor in C. elegans.
GEO Record: GSE21162 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00036375.ce.mr.csv (details)
20537990
Greer EL et al., 2010 23 Members of the H3K4 trimethylation complex regulate lifespan in a germline-dependent manner in C. elegans.
GEO Record: GSE30505 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00036383.ce.mr.csv (details)
20555324
Waters K et al., 2010 4 Genome-wide analysis of germ cell proliferation in C.elegans identifies VRK-1 as a key regulator of CEP-1/p53.
GEO Record: GSE21531 Platform: GPL540
Download gene-centric, log2 transformed data: WBPaper00036429.ce.mr.csv (details)
20599896
Irazoqui JE et al., 2010 6 Distinct pathogenesis and host responses during infection of C. elegans by P. aeruginosa and S. aureus.
GEO Record: GSE21819 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00036464.ce.mr.csv (details)
20617181
Ortega-Cuellar D et al., 2010 5 Biotin starvation with adequate glucose provision causes paradoxical changes in fuel metabolism gene expression similar in rat (Rattus norvegicus), nematode (Caenorhabditis elegans) and yeast (Saccharomyces cerevisiae).
GEO Record: GSE18157 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00037086.ce.mr.csv (details)
20798549
Vinuela A et al., 2010 18 Genome-wide gene expression analysis in response to organophosphorus pesticide chlorpyrifos and diazinon in C. elegans.
GEO Record: GSE16686 GSE16688 GSE16698 GSE16719 Platform: GPL4038
Download gene-centric, log2 transformed data: WBPaper00037113.ce.mr.csv (details)
20808445
McColl G et al., 2010 72 Insulin-like signaling determines survival during stress via posttranscriptional mechanisms in C. elegans.
GEO Record: GSE22383 Platform: GPL9458
Download gene-centric, log2 transformed data: WBPaper00037147.ce.mr.csv (details)
20816092
Rechtsteiner A et al., 2010 4 The histone H3K36 methyltransferase MES-4 acts epigenetically to transmit the memory of germline gene expression to progeny.
GEO Record: GSE58759 Platform: GPL18856
Download gene-centric, log2 transformed data: WBPaper00037131.ce.mr.csv (details)
20824077
Kim KW et al., 2010 21 GLD-2/RNP-8 cytoplasmic poly(A) polymerase is a broad-spectrum regulator of the oogenesis program.
GEO Record: GSE23843 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00037611.ce.mr.csv (details)
20855596
Thyagarajan B et al., 2010 6 ETS-4 is a transcriptional regulator of life span in Caenorhabditis elegans.
GEO Record: GSE21851 Platform: GPL7272
Download gene-centric, log2 transformed data: WBPaper00037624.ce.mr.csv (details)
20862312
Laing ST et al., 2010 6 Characterization of the xenobiotic response of Caenorhabditis elegans to the anthelmintic drug albendazole and the identification of novel drug glucoside metabolites.
GEO Record: GSE21747 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00037704.ce.mr.csv (details)
20929438
Luo S et al., 2010 17 TGF- and insulin signaling regulate reproductive aging via oocyte and germline quality maintenance.
GEO Record: GSE23446 GSE23447 GSE23448 GSE23509 Platform: GPL7727
Download gene-centric, log2 transformed data: WBPaper00037682.ce.mr.csv (details)
20946987
Rockman MV et al., 2010 208 Selection at linked sites shapes heritable phenotypic variation in C. elegans.
GEO Record: GSE23857 Platform: GPL7727
Download gene-centric, log2 transformed data: WBPaper00037680.ce.mr.csv (details)
20947766
van der Linden AM et al., 2010 89 Genome-wide analysis of light- and temperature-entrained circadian transcripts in Caenorhabditis elegans.
GEO Record: GSE23528 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00037695.ce.mr.csv (details)
20967231