SPELL - Nematode - Dataset Listing
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Dataset Listing

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SPELL Version 2.0.3

Publication Num.
Conditions
Brief Description PubMed ID
Pukkila-Worley R et al., 2011 9 Candida albicans infection of Caenorhabditis elegans induces antifungal immune defenses.
GEO Record: GSE27401 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00039851.ce.mr.csv (details)
21731485
van Wolfswinkel JC et al., 2009 4 CDE-1 affects chromosome segregation through uridylation of CSR-1-bound siRNAs.
GEO Record: GSE18202 Platform: GPL2875
Download gene-centric, log2 transformed data: WBPaper00035269.ce.mr.csv (details)
19804759
Von Stetina SE et al., 2007 24 Cell-specific microarray profiling experiments reveal a comprehensive picture of gene expression in the C. elegans nervous system.
GEO Record: GSE8004 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00030839.ce.mr.csv (details)
17612406
Zuckerman B et al., 2017 16 Characterization of gene expression associated with the adaptation of the nematode C. elegans to hypoxia and reoxygenation stress reveals an unexpected function of the neuroglobin GLB-5 in innate immunity.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00051223.ce.mr.csv (details)
28495447
Laing ST et al., 2010 6 Characterization of the xenobiotic response of Caenorhabditis elegans to the anthelmintic drug albendazole and the identification of novel drug glucoside metabolites.
GEO Record: GSE21747 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00037704.ce.mr.csv (details)
20929438
Ihara A et al., 2016 8 Cholesterol regulates DAF-16 nuclear localization and fasting-induced longevity in C. elegans.
GEO Record: GSE51046 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00050538.ce.mr.csv (details)
27989925
Pauli F et al., 2006 8 Chromosomal clustering and GATA transcriptional regulation of intestine-expressed genes in C. elegans.
GEO Record: GSE4150 Platform: GPL2766 GPL3390 GPL3411
Download gene-centric, log2 transformed data: WBPaper00026980.ce.mr.csv (details)
16354718
Roy PJ et al., 2002 6 Chromosomal clustering of muscle-expressed genes in Caenorhabditis elegans.
GEO Record: GSE2971 Platform: GPL2653
Download gene-centric, log2 transformed data: WBPaper00005428.ce.mr.csv (details)
12214599
Tabuchi TM et al., 2011 12 Chromosome-biased binding and gene regulation by the Caenorhabditis elegans DRM complex.
GEO Record: GSE28853 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00038427.ce.mr.csv (details)
21589891
Iser WB et al., 2011 8 Co-regulation of the DAF-16 target gene, cyp-35B1/dod-13, by HSF-1 in C. elegans dauer larvae and daf-2 insulin pathway mutants.
GEO Record: GSE18200 Platform: GPL2875
Download gene-centric, log2 transformed data: WBPaper00038237.ce.mr.csv (details)
21408062
Okur MN et al., 2020 32 Cockayne syndrome proteins CSA and CSB maintain mitochondrial homeostasis through NAD+ signaling.
GEO Record: GSE144556 GSE144558 Platform: GPL10094
Download gene-centric, log2 transformed data: WBPaper00064098.ce.mr.csv (details)
33166073
Kim Wong et al., 0 16 Comparative analysis of SAGE and microarray technologies for global transcription profiling of development in Caenorhabditis elegans
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00026950.ce.mr.csv (details)
0
McElwee MK et al., 2013 24 Comparative toxicogenomic responses of mercuric and methyl-mercury.
GEO Record: GSE28915 Platform: GPL7727
Download gene-centric, log2 transformed data: WBPaper00044316.ce.mr.csv (details)
24118919
Gong P et al., 2018 48 Comparative toxicogenomics of three insensitive munitions constituents 2,4-dinitroanisole, nitroguanidine and nitrotriazolone in the soil nematode Caenorhabditis elegans.
GEO Record: GSE92365 Platform: GPL22795
Download gene-centric, log2 transformed data: WBPaper00055899.ce.mr.csv (details)
30547801
McCarroll SA et al., 2004 14 Comparing genomic expression patterns across species identifies shared transcriptional profile in aging.
GEO Record: GSE832 GSE946 Platform: GPL576 GPL924
Download gene-centric, log2 transformed data: WBPaper00006365.ce.mr.csv (details)
14730301
Yanai I et al., 2009 13 Comparison of diverse developmental transcriptomes reveals that coexpression of gene neighbors is not evolutionarily conserved.
GEO Record: GSE15234 GSE15551 Platform: GPL8304 GPL8303
Download gene-centric, log2 transformed data: WBPaper00035187.cbg.mr.csv (details)
19745112
Yanai I et al., 2009 16 Comparison of diverse developmental transcriptomes reveals that coexpression of gene neighbors is not evolutionarily conserved.
GEO Record: GSE15234 GSE15551 Platform: GPL8304 GPL8303
Download gene-centric, log2 transformed data: WBPaper00035187.ce.mr.csv (details)
19745112
Sarkies P et al., 2013 20 Competition between virus-derived and endogenous small RNAs regulates gene expression in Caenorhabditis elegans.
GEO Record: GSE41056 GSE41058 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00042574.ce.mr.csv (details)
23811144
Watson JD et al., 2008 8 Complementary RNA amplification methods enhance microarray identification of transcripts expressed in the C. elegans nervous system.
GEO Record: GSE9485 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00031532.ce.mr.csv (details)
18284693
Baugh LR et al., 2003 12 Composition and dynamics of the Caenorhabditis elegans early embryonic transcriptome.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00005767.ce.mr.csv (details)
12538516
Zisoulis DG et al., 2010 6 Comprehensive discovery of endogenous Argonaute binding sites in Caenorhabditis elegans.
GEO Record: GSE19138 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00035588.ce.mr.csv (details)
20062054
Bond MR et al., 2014 36 Conserved nutrient sensor O-GlcNAc transferase is integral to C. elegans pathogen-specific immunity.
GEO Record: GSE53732 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00046083.ce.mr.csv (details)
25474640
Pathare PP et al., 2012 9 Coordinate regulation of lipid metabolism by novel nuclear receptor partnerships.
GEO Record: GSE34856 Platform: GPL9458
Download gene-centric, log2 transformed data: WBPaper00040998.ce.mr.csv (details)
22511885
Kirienko NV et al., 2008 6 Coordinated regulation of intestinal functions in C. elegans by LIN-35/Rb and SLR-2.
GEO Record: GSE9246 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00031832.ce.mr.csv (details)
18437219
van Wijk MH et al., 2023 94 Cryptic genetic variation of eQTL architecture revealed by genetic perturbation in C. elegans.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00065209.ce.mr.csv (details)
36861370
Menzel R et al., 2007 8 Cytochrome P450s and short-chain dehydrogenases mediate the toxicogenomic response of PCB52 in the nematode Caenorhabditis elegans.
GEO Record: GSE7125 Platform: GPL4469
Download gene-centric, log2 transformed data: WBPaper00029387.ce.mr.csv (details)
17499272
Mueller MM et al., 2014 15 DAF-16/FOXO and EGL-27/GATA promote developmental growth in response to persistent somatic DNA damage.
GEO Record: GSE47778 GSE51161 GSE51162 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00047070_1.ce.mr.csv (details)
25419847
Mueller MM et al., 2014 36 DAF-16/FOXO and EGL-27/GATA promote developmental growth in response to persistent somatic DNA damage.
GEO Record: GSE47778 GSE51161 GSE51162 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00047070_2.ce.mr.csv (details)
25419847
Hibshman JD et al., 2017 12 daf-16/FoxO promotes gluconeogenesis and trehalose synthesis during starvation to support survival.
GEO Record: GSE99201 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00053236.ce.mr.csv (details)
29063832
Meyer JN et al., 2007 8 Decline of nucleotide excision repair capacity in aging Caenorhabditis elegans.
GEO Record: GSE4766 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00029334.ce.mr.csv (details)
17472752