SPELL - Nematode - Dataset Listing
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SPELL Version 2.0.3

Publication Num.
Conditions
Brief Description PubMed ID
Ward JD et al., 2014 6 Defects in the C. elegans acyl-CoA synthase, acs-3, and nuclear hormone receptor, nhr-25, cause sensitivity to distinct, but overlapping stresses.
GEO Record: GSE48605 Platform: GPL5859
Download gene-centric, log2 transformed data: WBPaper00045015.ce.mr.csv (details)
24651852
Washburn MC et al., 2014 8 The dsRBP and inactive editor ADR-1 utilizes dsRNA binding to regulate A-to-I RNA editing across the C. elegans transcriptome.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00044827.ce.rs.csv (details)
24508457
Waters K et al., 2010 4 Genome-wide analysis of germ cell proliferation in C.elegans identifies VRK-1 as a key regulator of CEP-1/p53.
GEO Record: GSE21531 Platform: GPL540
Download gene-centric, log2 transformed data: WBPaper00036429.ce.mr.csv (details)
20599896
Watson E et al., 2013 9 Integration of metabolic and gene regulatory networks modulates the C. elegans dietary response.
GEO Record: GSE43952 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00042204.ce.mr.csv (details)
23540702
Watson JD et al., 2008 8 Complementary RNA amplification methods enhance microarray identification of transcripts expressed in the C. elegans nervous system.
GEO Record: GSE9485 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00031532.ce.mr.csv (details)
18284693
Weimer S et al., 2014 12 D-Glucosamine supplementation extends life span of nematodes and of ageing mice.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00045095.ce.rs.csv (details)
24714520
Welker NC et al., 2007 5 Genes misregulated in C. elegans deficient in Dicer, RDE-4, or RDE-1 are enriched for innate immunity genes.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00029437.ce.mr.csv (details)
17526642
Whetstine JR et al., 2005 3 Regulation of tissue-specific and extracellular matrix-related genes by a class I histone deacetylase.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00025192.ce.mr.csv (details)
15893731
Wong D et al., 2007 34 Genome-wide investigation reveals pathogen-specific and shared signatures in the response of Caenorhabditis elegans to infection.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00030985.ce.mr.csv (details)
17875205
Wright JE et al., 2011 15 A quantitative RNA code for mRNA target selection by the germline fate determinant GLD-1.
GEO Record: GSE21591 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00037901.ce.mr.csv (details)
21169991
Xiao Y et al., 2017 3 PKA/KIN-1 mediates innate immune responses to bacterial pathogens in Caenorhabditis elegans.
GEO Record: GSE86342 Platform: GPL11346
Download gene-centric, log2 transformed data: WBPaper00053137.ce.mr.csv (details)
28958206
Yanai I et al., 2008 74 Pairing of competitive and topologically distinct regulatory modules enhances patterned gene expression.
GEO Record: GSE9665 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00031525.ce.mr.csv (details)
18277379
Yanai I et al., 2009 13 Comparison of diverse developmental transcriptomes reveals that coexpression of gene neighbors is not evolutionarily conserved.
GEO Record: GSE15234 GSE15551 Platform: GPL8304 GPL8303
Download gene-centric, log2 transformed data: WBPaper00035187.cbg.mr.csv (details)
19745112
Yanai I et al., 2009 16 Comparison of diverse developmental transcriptomes reveals that coexpression of gene neighbors is not evolutionarily conserved.
GEO Record: GSE15234 GSE15551 Platform: GPL8304 GPL8303
Download gene-centric, log2 transformed data: WBPaper00035187.ce.mr.csv (details)
19745112
Yang W et al., 2015 24 Overlapping and unique signatures in the proteomic and transcriptomic responses of the nematode Caenorhabditis elegans toward pathogenic Bacillus thuringiensis.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00046497.ce.rs.csv (details)
25720978
Yee C et al., 2014 22 The intrinsic apoptosis pathway mediates the pro-longevity response to mitochondrial ROS in C. elegans.
GEO Record: GSE54024 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00045263.ce.mr.csv (details)
24813612
Youngman MJ et al., 2011 9 A decline in p38 MAPK signaling underlies immunosenescence in Caenorhabditis elegans.
GEO Record: GSE21784 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00038462.ce.mr.csv (details)
21625567
Yuzyuk T et al., 2009 21 The polycomb complex protein mes-2/E(z) promotes the transition from developmental plasticity to differentiation in C. elegans embryos.
GEO Record: GSE14913 Platform: GPL8209
Download gene-centric, log2 transformed data: WBPaper00033206.ce.mr.csv (details)
19460346
Zarse K et al., 2012 6 Impaired insulin/IGF1 signaling extends life span by promoting mitochondrial L-proline catabolism to induce a transient ROS signal.
GEO Record: GSE36041 Platform: GPL13776
Download gene-centric, log2 transformed data: WBPaper00040959.ce.rs.csv (details)
22482728
Zhang L et al., 2007 20 Systematic identification of C. elegans miRISC proteins, miRNAs, and mRNA targets by their interactions with GW182 proteins AIN-1 and AIN-2.
GEO Record: GSE9073 Platform: GPL5883
Download gene-centric, log2 transformed data: WBPaper00031252.ce.mr.csv (details)
18042455
Zhang L et al., 2009 36 Systematic analysis of dynamic miRNA-target interactions during C. elegans development.
GEO Record: GSE16208 Platform: GPL5883
Download gene-centric, log2 transformed data: WBPaper00035084.ce.mr.csv (details)
19675127
Zhang T et al., 2012 6 Caenorhabditis elegans RNA-processing protein TDP-1 regulates protein homeostasis and life span.
GEO Record: GSE34113 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00040603.ce.mr.csv (details)
22232551
Zhang Y et al., 2002 1 Identification of genes expressed in C. elegans touch receptor neurons.
GEO Record: GSE3121 Platform: GPL2646 GPL2754
Download gene-centric, log2 transformed data: WBPaper00005356.ce.mr.csv (details)
12124626
Zhang Z et al., 2016 33 FOS-1 functions as a transcriptional activator downstream of the C. elegans JNK homolog KGB-1.
GEO Record: GSE82238 Platform: GPL9458
Download gene-centric, log2 transformed data: WBPaper00050448.ce.mr.csv (details)
27864060
Zheng Q et al., 2011 8 Regulation of C. elegans presynaptic differentiation and neurite branching via a novel signaling pathway initiated by SAM-10.
GEO Record: GSE25285 Platform: GPL5859
Download gene-centric, log2 transformed data: WBPaper00037849.ce.mr.csv (details)
21115607
Ziegler K et al., 2009 8 Antifungal innate immunity in C. elegans: PKCdelta links G protein signaling and a conserved p38 MAPK cascade.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00033094.ce.mr.csv (details)
19380113
Zisoulis DG et al., 2010 6 Comprehensive discovery of endogenous Argonaute binding sites in Caenorhabditis elegans.
GEO Record: GSE19138 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00035588.ce.mr.csv (details)
20062054
Zuckerman B et al., 2017 16 Characterization of gene expression associated with the adaptation of the nematode C. elegans to hypoxia and reoxygenation stress reveals an unexpected function of the neuroglobin GLB-5 in innate immunity.
GEO Record: GSE93149 Platform: GPL11346
Download gene-centric, log2 transformed data: WBPaper00051223.ce.mr.csv (details)
28495447