SPELL - Nematode - Dataset Listing
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SPELL Version 2.0.3

Publication Num.
Conditions
Brief Description PubMed ID
Phirke P et al., 2011 12 Transcriptional profiling of C. elegans DAF-19 uncovers a ciliary base-associated protein and a CDK/CCRK/LF2p-related kinase required for intraflagellar transport.
GEO Record: GSE25633 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00039866.ce.mr.csv (details)
21740898
Pietsch K et al., 2012 24 Meta-Analysis of Global Transcriptomics Suggests that Conserved Genetic Pathways are Responsible for Quercetin and Tannic Acid Mediated Longevity in C. elegans.
GEO Record: GSE35354 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00040963.ce.mr.csv (details)
22493606
Polyak E et al., 2018 75 N-acetylcysteine and vitamin E rescue animal longevity and cellular oxidative stress in pre-clinical models of mitochondrial complex I disease.
GEO Record: GSE66680 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00053833.ce.mr.csv (details)
29526616
Portman DS et al., 2004 1 Identification of C. elegans sensory ray genes using whole-genome expression profiling.
GEO Record: GSE3979 Platform: GPL2646 GPL3308 GPL3309
Download gene-centric, log2 transformed data: WBPaper00013489.ce.mr.csv (details)
15183729
Pujol N et al., 2008 12 Anti-fungal innate immunity in C. elegans is enhanced by evolutionary diversification of antimicrobial peptides.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00032031_2.ce.mr.csv (details)
18636113
Pujol N et al., 2008 32 Anti-fungal innate immunity in C. elegans is enhanced by evolutionary diversification of antimicrobial peptides.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00032031.ce.mr.csv (details)
18636113
Pukkila-Worley R et al., 2011 9 Candida albicans infection of Caenorhabditis elegans induces antifungal immune defenses.
GEO Record: GSE27401 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00039851.ce.mr.csv (details)
21731485
Pukkila-Worley R et al., 2012 6 Stimulation of host immune defenses by a small molecule protects C. elegans from bacterial infection.
GEO Record: GSE37266 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00041211.ce.mr.csv (details)
22719261
Quach TK et al., 2013 9 Genome-wide microarrray analysis reveals roles for the REF-1 family member HLH-29 in ferritin synthesis and peroxide stress response.
GEO Record: GSE65417 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00042178.ce.mr.csv (details)
23533643
Rae R et al., 2012 7 Genome-wide analysis of germline signaling genes regulating longevity and innate immunity in the nematode Pristionchus pacificus.
GEO Record: GSE37331 GSE37337 Platform: GPL14372
Download gene-centric, log2 transformed data: WBPaper00041466.ppa.mr.csv (details)
22912581
Rajagopal A et al., 2008 9 Haem homeostasis is regulated by the conserved and concerted functions of HRG-1 proteins.
GEO Record: GSE8696 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00031703.ce.mr.csv (details)
18418376
Rechtsteiner A et al., 2010 4 The histone H3K36 methyltransferase MES-4 acts epigenetically to transmit the memory of germline gene expression to progeny.
GEO Record: GSE58759 Platform: GPL18856
Download gene-centric, log2 transformed data: WBPaper00037131.ce.mr.csv (details)
20824077
Reichert K et al., 2005 12 Expression profiling of five different xenobiotics using a Caenorhabditis elegans whole genome microarray.
GEO Record: GSE4111 Platform: GPL2646 GPL2655 GPL2766 GPL3097 GPL3396
Download gene-centric, log2 transformed data: WBPaper00026820.ce.mr.csv (details)
16168746
Reinke V et al., 2000 13 A global profile of germline gene expression in C. elegans.
GEO Record: GSE5 Platform: GPL14
Download gene-centric, log2 transformed data: WBPaper00004349.ce.mr.csv (details)
11030340
Reinke V et al., 2004 18 Genome-wide germline-enriched and sex-biased expression profiles in Caenorhabditis elegans.
GEO Record: GSE696 GSE715 GSE716 GSE717 GSE718 GSE719 GSE720 GSE721 GSE722 GSE723 GSE724 GSE725 GSE726 GSE727 GSE728 GSE729 GSE730 GSE731 GSE732 GSE733 GSE734 GSE735 GSE736 GSE737 Platform: GPL446 GPL539 GPL540
Download gene-centric, log2 transformed data: WBPaper00006390.ce.mr.csv (details)
14668411
Reinke, Valerie et al., 2010 6 Few gene expression differences between C. elegans grown in liquid versus on plates
GEO Record: GSE21526 Platform: GPL8673
Download gene-centric, log2 transformed data: WBPaper00038011.ce.mr.csv (details)
0
Rhoads TW et al., 2015 9 NeuCode Labeling in Nematodes: Proteomic and Phosphoproteomic Impact of Ascaroside Treatment in Caenorhabditis elegans.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00048573.ce.ms.csv (details)
26392051
Riedel CG et al., 2013 8 DAF-16 employs the chromatin remodeller SWI/SNF to promote stress resistance and longevity.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00042296.ce.rs.csv (details)
23604319
Rizki G et al., 2011 28 The evolutionarily conserved longevity determinants HCF-1 and SIR-2.1/SIRT1 collaborate to regulate DAF-16/FOXO.
GEO Record: GSE30725 Platform: GPL13922
Download gene-centric, log2 transformed data: WBPaper00040184.ce.mr.csv (details)
21909281
Robert VJ et al., 2014 12 The SET-2/SET1 histone H3K4 methyltransferase maintains pluripotency in the Caenorhabditis elegans germline.
GEO Record: GSE61094 Platform: GPL10094
Download gene-centric, log2 transformed data: WBPaper00045861.ce.mr.csv (details)
25310986
Rockman MV et al., 2010 208 Selection at linked sites shapes heritable phenotypic variation in C. elegans.
GEO Record: GSE23857 Platform: GPL7727
Download gene-centric, log2 transformed data: WBPaper00037680.ce.mr.csv (details)
20947766
Rogers AN et al., 2011 24 Life span extension via eIF4G inhibition is mediated by posttranscriptional remodeling of stress response gene expression in C. elegans.
GEO Record: GSE28665 Platform: GPL9458
Download gene-centric, log2 transformed data: WBPaper00039835.ce.mr.csv (details)
21723504
Roh JY et al., 2009 2 Ecotoxicity of silver nanoparticles on the soil nematode Caenorhabditis elegans using functional ecotoxicogenomics.
GEO Record: GSE14932 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00034661.ce.mr.csv (details)
19544910
Rohlfing AK et al., 2010 30 Genetic and physiological activation of osmosensitive gene expression mimics transcriptional signatures of pathogen infection in C. elegans.
GEO Record: GSE19310 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00035873.ce.mr.csv (details)
20126308
Romagnolo B et al., 2002 29 Downstream targets of let-60 Ras in Caenorhabditis elegans.
GEO Record: GSE2974 Platform: GPL2653
Download gene-centric, log2 transformed data: WBPaper00005376.ce.mr.csv (details)
12074557
Romiguier J et al., 2014 10 Comparative population genomics in animals uncovers the determinants of genetic diversity.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00046067.cbn.rs.csv (details)
25141177
Roy PJ et al., 2002 6 Chromosomal clustering of muscle-expressed genes in Caenorhabditis elegans.
GEO Record: GSE2971 Platform: GPL2653
Download gene-centric, log2 transformed data: WBPaper00005428.ce.mr.csv (details)
12214599
Rytinki MM et al., 2011 9 Overexpression of SUMO perturbs the growth and development of Caenorhabditis elegans.
GEO Record: GSE19972 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00038060.ce.mr.csv (details)
21253676
Saha S et al., 2016 1 Polar Positioning of Phase-Separated Liquid Compartments in Cells Regulated by an mRNA Competition Mechanism.
GEO Record: N.A. Platform: N.A.
Download gene-centric, log2 transformed data: WBPaper00050091.ce.ms.csv (details)
27594427
Sahu SN et al., 2012 15 Genomic analysis of immune response against Vibrio cholerae hemolysin in Caenorhabditis elegans.
GEO Record: GSE34026 Platform: GPL200
Download gene-centric, log2 transformed data: WBPaper00041163.ce.mr.csv (details)
22675448